CI01000112_03932803_03933881


Basic Information

Item Value
gene id CI01000112_03932803_03933881
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 3932803 ~ 3933912 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_03932803_03933881.mRNA
AAAAGCCAGAGGATCTTCCACTGGAGACATGGACTGAGTCTATGGTGAGCAACTGGTTAAGATCAATAGGAATTAAAGAAACATACATCGAAAAACTTCATGAAGAGGAAGTAGATGGTCGGATACTTTGTGAACTATCAGAAGAATATCTGAAAAAAGAGACTGGAATGAAATCTGGGCCTGCGCTTTTGATAATAAAAAAAAGAGATGAGTTAGTAATTAATTCACAAAAAGCCAAAGGCCAGCATGATCTTTTACAAAAACGGTCTTCTGGAAAAAATGACCTTGGAGCAAGTGCAATTAAAAGCACTGACACAAGAGCCGATATCAATGAAGAGAATAACAAGGAAGAAGATTCTGTACTTGTGGTACCAACAAAGAGAGATTCAAAACTTCGACCTTTTGATATGAAAGGTGTTGATTTTACATATGTTAAGAACAGTGTACTCTTACCAGAATCAGGGGTTAATGATTTAATTACTCCATGTCATGAGTATAAGTCATTTGCCGTTGCTGCAACACTGGACCGCCAAAGACTACAAGCCAAGTTTGCAAAGGAAGTGCTGAAATTTGCTACAGGCTGTATAAATGTTCGTACAAACGGCACAATACATTTTGGTGTCATGGACAGTAGAGGTGACACTGGTTATGTACATGGTGAAATCATTGGTGTTCCTGTTAAGGAAAAAGATGTATACTATGATTCATTCGATTACATTGAGAGGAGTTTCTCTAGCTCTGATAGCGAAATTGTACGGCTTTGTATTGGTGAACCTCAGTTTGTTAAAGTAGTTTGTTCAAACAGCAACGTGGAACACTATGTTGTGGAGGTTGATATTAAGCCAGCAGTGAGCATAGTGAAGAATAATGTGTTCTCTGTTAGCCTGCCAAATTTCAATGAGAAGGCAAACAAAGTTCAGTTTGAGAAGAAAACCGCTTATCGCAGAGTGGGTTCTAAAACAGAACCAGTGGCTGACCTGAATGAGTTCTATCAACACATGAGTTTTAGGAATGCTCAGAGAGAAGAGGCAGAGAAAACATATAATTTCACAGCACCACAACTGTGCCAGAACCTGTGAAAAAAGCTCAAAATGCTCATAACAGGTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_03932803_03933881.mRNA True 1110 mRNA 0.39 1 3932803 3933912

Neighbor

gene id symbol gene type direction distance location
CI01000112_03896750_03921778 ERN1 coding upstream 9639 3896750 ~ 3923164 (+)
CI01000112_03861399_03879738 TEX2 coding upstream 53051 3861399 ~ 3879752 (+)
CI01000112_03759872_03772553 AXIN2 coding upstream 159821 3759803 ~ 3772982 (+)
CI01000112_03653384_03730444 NA coding upstream 202355 3653384 ~ 3730448 (+)
CI01000112_03608324_03621681 NA coding upstream 311115 3608324 ~ 3621688 (+)
CI01000112_03933921_03937412 NA coding downstream 9 3933921 ~ 3937708 (+)
CI01000112_03956622_03957718 MAFGA, MAFGB, MAFG coding downstream 22710 3956622 ~ 3957867 (+)
CI01000112_03978196_03991078 PCYT2, PCY2 coding downstream 44284 3978196 ~ 3991078 (+)
CI01000112_04004799_04012301 NA coding downstream 70663 4004575 ~ 4012680 (+)
CI01000112_04020422_04027554 NA coding downstream 86372 4020284 ~ 4027746 (+)
G329513 NA non-coding upstream 6627 3859478 ~ 3926176 (+)
G329517 NA non-coding upstream 49859 3811534 ~ 3882944 (+)
G329413 NA non-coding upstream 389777 3533229 ~ 3543026 (+)
G329381 NA non-coding upstream 544352 3388250 ~ 3388451 (+)
G329380 NA non-coding upstream 545433 3387157 ~ 3387370 (+)
G329512 NA non-coding downstream 38204 3972116 ~ 3973883 (+)
G330383 NA non-coding downstream 170326 4104238 ~ 4104501 (+)
G330402 NA non-coding downstream 214607 4148519 ~ 4148864 (+)
G330404 NA non-coding downstream 216075 4149987 ~ 4150244 (+)
G330396 NA non-coding downstream 221487 4155399 ~ 4157165 (+)
G329194 NA other upstream 1000914 2920254 ~ 2931889 (+)
G329125 NA other upstream 1314652 2617704 ~ 2618151 (+)
G328456 NA other upstream 2699685 1232022 ~ 1233118 (+)
CI01000112_05076817_05101845 NA other downstream 1150808 5076817 ~ 5101845 (+)

Expression


Co-expression Network