CI01000113_01502427_01506373


Basic Information

Item Value
gene id CI01000113_01502427_01506373
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1502161 ~ 1506373 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01502427_01506373.mRNA
ATGACAGCTAGACTGGTTCAGAAATCCACTGAACAGGGGGTTGTTTCAAATGGGCACTACATTACCCAGAATGCAACGGTAGGCAACATTCGCTGCGATTGGATGTTCGTCAGATCGCATGAGGAGCACGTAAAGGGAACCTCACTACTAAGAAAACAATCCACGATGTCTGGACGACGAAGAGTGGTGGTGTTTCCCTCTGTGGCCGAGCTCGGATCCTCTCTGGCCCAGCTGGTGTCCTCTCGTGCAGAGAAAGCTCTAAGCGGAGGTGGAAGCTCCTTTTCTCTAGGTCTTTCAGGAGGGAGTTTGGTTTCCATCCTGAGTAAGGAGCTGCCTGCTGTACCGAACCTGGACTGCAGCAGATGGCTTATCGGCTTCTGTGATGAGAGACTCGTTCCATTCAGTGATCCTGAGAGCACTTATGGCTTATATAAGAATCAATTGTTTGAGAAAATCAACGTTCCAGAAGATCGGATTTTGGCTATAGATCCTTCTTTACCTGTGCAAGAATGTGCTGACGATTATGTTGGCAAACTCAGCAAGGAAAGCCAGAGGACAGTGGCCCCAATCTCTGATTCCCCCAAACCACCCCCTCACCGTGTCACTATGACATTACCCACGGTCAACGCTGCTCGATGTGTGGTGTTTGTGTCAACAGGAGGCAGCAAAGCTCCTATGCTCAAGCAAGTATTGGAGGGTGGAGAAGGCCCCGCACTTCCAGCAGCTCTGGTGGCACCTGGACAGGGAGAGCTCTTCTGGCTTGTGGATGAGCCAGCAGCTGCCTCCCTCACGTCTCAGGTGGAGAGACCAGGGCCTGGGGCAAAACTCTGACAGAACTTGTGGAAGCACTTTCTAGTATTCCTATGGAGTCCATAAACTGTGTTTGCAAAGATTTTTTCTTCATAGCACTTATGAAAATCATAACTGTAATTACTGCAGTTATTATTACTGTAAACTAAAAAAAAGGGGGATCTTTGAAGTTTTCAGAATTTGTTGTTTAATTTTTTTAAAAACACAATTGTTACCATAGGTTTATTATCGTAACAATAACTGTGGAAACAATAGTTGCCATTGTACATTTTGTTAGATGCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01502427_01506373.mRNA True 1097 mRNA 0.46 5 1502161 1506373

Neighbor

gene id symbol gene type direction distance location
CI01000113_01480199_01500090 COLGALT1 coding downstream 1890 1479477 ~ 1500271 (-)
CI01000113_01458405_01476967 GMIP coding downstream 25194 1458405 ~ 1476967 (-)
CI01000113_01432095_01456239 LMX1AL coding downstream 45922 1431986 ~ 1456239 (-)
CI01000113_01404787_01423732 ATP13A1 coding downstream 78429 1404666 ~ 1423732 (-)
CI01000113_01396970_01402406 NA coding downstream 99755 1396431 ~ 1402406 (-)
CI01000113_01554726_01565897 SLC27A1A, SLC27A1 coding upstream 47771 1554144 ~ 1565897 (-)
CI01000113_01569971_01571224 PTGER1C coding upstream 62965 1569308 ~ 1571802 (-)
CI01000113_01589305_01600983 NA coding upstream 82781 1589154 ~ 1601012 (-)
CI01000113_01652528_01653349 NA coding upstream 146013 1652386 ~ 1653446 (-)
CI01000113_01846674_01851715 BTBD17B coding upstream 339995 1846368 ~ 1851790 (-)
G332587 NA non-coding downstream 93729 1407820 ~ 1408432 (-)
CI01000113_01252186_01255334 NA non-coding downstream 246751 1252186 ~ 1255410 (-)
G332523 NA non-coding downstream 255588 1246293 ~ 1246573 (-)
G332574 NA non-coding downstream 262205 1239671 ~ 1239956 (-)
G332524 NA non-coding downstream 383614 1117811 ~ 1118547 (-)
G332596 NA non-coding upstream 36861 1543234 ~ 1543454 (-)
G332597 NA non-coding upstream 37817 1544190 ~ 1544419 (-)
G332598 NA non-coding upstream 38993 1545366 ~ 1545584 (-)
G332599 NA non-coding upstream 39630 1546003 ~ 1546223 (-)
G332600 NA non-coding upstream 40044 1546417 ~ 1546764 (-)
G332160 NA other downstream 1055324 390227 ~ 446837 (-)
G332210 NA other downstream 1452676 47990 ~ 49485 (-)
G332649 NA other upstream 640841 2147214 ~ 2148558 (-)
G332837 NA other upstream 744472 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 861243 2356565 ~ 2370009 (-)

Expression


Co-expression Network