CI01000113_01589305_01600983


Basic Information

Item Value
gene id CI01000113_01589305_01600983
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1589154 ~ 1601012 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01589305_01600983.mRNA
AATTTGCAAGTCTCTTTCACTCTTTGACCATGAGGCACATCTATCTGCTGAGTCTGGGTATTTTATTGACACTGACAGAGAGCACTGTGAGTGAATGCCCCGATGGATATAAAAGATTTACGAAGGGGCACTATACAAACTGTACAGATGAAGATGAGTGTGAGTCTGAACCACTCATTTGTGGAGAAAATGCAAGATGTCTCAACACAAATGGCAGTTACTACTGTCTGTGTCAAGAAGGGTTCACACCAACTCATAATTTCACAGCAAAGGATGGTAGTGTATGCCAAGACATCAATGAATGTGTGGATCAAAGCATTGATTGTGGTCCTAATGCAAATTGTGTAAATGCTGAAGGAGGTTATTCCTGCACATGTGAACCTGGCTACATTTCCAGCAATGGGAAAGAGATGTTTTCTGCAGGACAAGGAATTCAATGTATTGACAGAGATGTATGCACCGATCCCAGTATTTGTGGAATAAATGCAACATGTCATAACACGTACAGTAATTTCTATTGCATCTGTGCTGCGGGCTTCAGACTGAAGTCAGGAGAAACTAACTTCACTGATCCAAATGAATCCTGCATGAGTGTTTGTGACATTGATAAATCCATCTGTGGAGAAGGAGGAGTCTGCCATAACAGCAAAGACGGCCATGAATGTGTGTGCAGGTCAGGATTCACCAACTATGGTCACAAACAAATGAAGTGCACAGAGCTCAAGTGTAACACAATTATAAGTGAGAGCAAAGCATCCCAGGCATCTCCAGAGCTAACAAAACTTGTCTCCTTCATGAACAACAACTGTTTGGCACTGAAGAAGAGCGAGTCTGTCAGTTTTAAACAAGGGGGCGGAGAAAGACTTCTTGAGGCGTTTCTGAGTGCTTTAGATAGTCTGCTTGACGGTGGCTTCCAAGGTGGTAACCATGAAGTGTCAGCAATGTTTAATATTGTGGAACGCATGCTAAAACTGATAGGACCTCTGCTGTCAGAAAGCCAGACCAAGAGATCAAGCAATAAAACCGAGGTGGAGCTGTTGGTAAAGTGGGGCAAATCTCCACCTGAGGGTGATTTCAATATATCCTCCAGCCGCACACAGTTTACATCCCACTGGGACACAGCAACAGGAAATACATACCTTGGCTTTACGACTGCAGCTCTTCTCAGCTATAAAGGTCTGGAAGAATCACTCAACCGCTATTTTAACCATTTAGAAACACGGAAAAAGCAGACTTTTAAGATAAATTCAAAAGTAGTAACTGCCACTGTTAGTAATACAGAGACTGACAATCTACAGAAACCAGTAAATCTCACGTTTTCTCACTTGGAGAACACAAATGAGACACATATCTGTGTGTTTTGGGATCCTAAACTGAAAGGGGGCGCGTGGTCAAAAGAAGGCTGCACTAGAGTGAACTCCAATGATGTCCAGACTGTCTGCTCCTGTAGTCACCTCAGCAGCTTTGCTGTGCTGATGGCTCTCTATGACATTGGGGATGTATATGAGCTGACTCTGATCACATGGGTGGGACTGCCACTGTCTCTGGTCTGCCTCCTCATCTGCATTATCACATTTTACTTGGTGCGATCTATCCAGAGCACACGCAACACCATCCACCTGCACCTCTGCATCAGCCTCTTCATCGCCTACTTTGTGTTCCTCGTGGGCATCACCCGCACAGAAAATGAGGTGGGCTGTGCAGTTGTTGCGGGCGTGCTGCACTATTTCTTCCTGGCTTCGTTCTGCTGGATGTGTCTGGAAGGAGTGCAGCTGTTCCGCATGGTGGTGCTGGTCTTCAACACAACGCTGAGACCCATCTATATGATTGCCGCTGGTTATGGAGTTCCTGCTGTTATCGTTGCAATTTCAGCCACAGTGAATGCAAGTGGATATGGCACTCCGGGCTACTGTTGGCTCAACATTCAAGATGGTTTCATTTGGAGCTTTTATGGGCCAGTTTGCGCCATAATTATTGTTAATGTATTCTTCTTCCTCATAACAATATGGAAGCTGGCAGAAAAATTTTCCTCCCTCAACCCTGACTTAAACAATCTACACAAAATCAAGGCATTTACGGTCACTGCGATTGCTCAGCTGTGTGTCCTTGGCATCATGTGGGTGTTTGGATGTTTTCAGTTTAATAAAGACACTCTGGCAATGTCATACATCTTCACTATACTAAGCAGCCTGCAGGGGGTGCTGATGTTCATCTTGCATTGCTGGCTCTCAAAACAAGTGAGAGACGAGTATGCCAAATTCCTGTCAAGTATCTGTACACCACAGAAGAGGAAATATTCAGAGTTCAGCTCAAACCAAACAAGCAAATCGCAGGGCTCCAAGAGTGCTCAGCACACTGGTGAATCCCACATTTAGGAGGCCATGTCAACAGACCATCGACTTTATCATTCATTTGCAAGATGAAGTGTCACATTATCTCTCTATATCTGCTTTATGGAAATGATATTGTATTTGAGTGATTAGTAATTTAGGGGAACTTTTCTTTCCCTTAGTGTCATTTAAAAAA

Function

NR:

description
CD97 antigen precursor, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01589305_01600983.mRNA True 2526 mRNA 0.44 19 1589154 1601012

Neighbor

gene id symbol gene type direction distance location
CI01000113_01569971_01571224 PTGER1C coding downstream 17352 1569308 ~ 1571802 (-)
CI01000113_01554726_01565897 SLC27A1A, SLC27A1 coding downstream 23257 1554144 ~ 1565897 (-)
CI01000113_01502427_01506373 NA coding downstream 82781 1502161 ~ 1506373 (-)
CI01000113_01480199_01500090 COLGALT1 coding downstream 88883 1479477 ~ 1500271 (-)
CI01000113_01458405_01476967 GMIP coding downstream 112187 1458405 ~ 1476967 (-)
CI01000113_01652528_01653349 NA coding upstream 51374 1652386 ~ 1653446 (-)
CI01000113_01846674_01851715 BTBD17B coding upstream 245356 1846368 ~ 1851790 (-)
CI01000113_01854931_01857730 NA coding upstream 253754 1854766 ~ 1858875 (-)
CI01000113_01871256_01883265 PDGFAB coding upstream 269378 1870390 ~ 1884400 (-)
CI01000113_01908893_01913809 NA coding upstream 307727 1908739 ~ 1914228 (-)
G332611 NA non-coding downstream 2879 1586026 ~ 1586275 (-)
G332601 NA non-coding downstream 41619 1547128 ~ 1547535 (-)
G332600 NA non-coding downstream 42390 1546417 ~ 1546764 (-)
G332599 NA non-coding downstream 42931 1546003 ~ 1546223 (-)
G332621 NA non-coding upstream 43988 1645000 ~ 1645350 (-)
G332622 NA non-coding upstream 57713 1658725 ~ 1658938 (-)
G332623 NA non-coding upstream 61744 1662756 ~ 1662984 (-)
G332624 NA non-coding upstream 62013 1663025 ~ 1663256 (-)
G332701 NA non-coding upstream 96202 1697214 ~ 1816436 (-)
G332160 NA other downstream 1142317 390227 ~ 446837 (-)
G332210 NA other downstream 1539669 47990 ~ 49485 (-)
G332649 NA other upstream 546202 2147214 ~ 2148558 (-)
G332837 NA other upstream 649833 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 766604 2356565 ~ 2370009 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location