CI01000158_00102003_00103016


Basic Information

Item Value
gene id CI01000158_00102003_00103016
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 101852 ~ 103043 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000158_00102003_00103016.mRNA
AAACTCCTAACAGGAGGAGACTCACTCATGGCCTATGAGACAGAGGATCATGAGACTCAATACTGCTTTCCTGCCATCAACTCATCATGTATCAAGGGAAAACGCTCCAGATATGAATACAGTTTCATGTATGTGTTTTTTTCATTGCTGTCAGCATGGACTGTGTTTCTGAACCTGCTGGTGATCATCTCCATCTCTCACTTCAAGAAGCTTCACACTCCAACCAACCTGATTATTCTCTCTCTGGCTGTGGCCGACCTGCTTGTTGGACTTATTGTGATGCCTGTGGATGCCATTAAGCTGACTGAAACATGCTGGTTCTTTGGAGACACTTTGTGTGACCTGTTTATGATAATTATGGGTCTGGTCCTCTCAACATCTATTTGTAATTTACTTTTAATTGCTATTGATCGTTATGTGGCTGTGTGTCACCCTTTGCTGTACCCACAGAAAATAACCACAACTAAAACCTTAATAAGCATCTGTTTTTGCTGGGTTTTCTCTTTTGTCTACAATACTGTCTATCTGATTAGTTTCAGATATTTTGAAAGTTCACAAAGAACAGACACATGCTATGGAAAGTGCTATTTAATAATAGATTTTTCATGGACAGTCGTTGACGTGTTCATTTCTTTCTTGTTTCCTTTGACTGTGATCATAACTTTATATTTGAGGATATTTTATGTCGCACATCAGCAAGTGAAAGTTATAAACTCTCTGATGAAGGGCGGTAAATGTGTAAAGGAAGGTTCAGTGAGGAGGAAATCAGAGAGCAAAGCTGCTCTGACATTAGGAATTATTGTGACAGCTTATCTGCTGTGCTTTATTCCATACTATATCTTGTCTTTAACAAGTAGTACAATAACCTCTTCTGCTGCAATAACATTTCTAATATGGACTATATATGCTAACTCAGGCATGAATCCTGTTGTCTATGCTTTATTTTACCGCTGGTTTAAAATATCAGTTAAACACATCTTAACTCTTAAAATATTGAAGCCAGCATCCTCTCTCTCAGATATATTTACAGATTGTTCATGATTTGTGTAGAATTTTTTTTTTTTTTTTTGATAAAGCACAAACTCATGTAGTAGATGTTATCTCAGTTTGTAAACTGAATGTGAACATACTGGATACCAGATATCAGATATCAGATATGCCATATCAGCTGATTAACAGGAAAAAAAATAAA

Function

NR:

description
Taar9 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000158_00102003_00103016.mRNA True 1192 mRNA 0.37 1 101852 103043

Neighbor

gene id symbol gene type direction distance location
CI01000158_00047164_00048174 NA coding downstream 53499 46972 ~ 48353 (-)
CI01000158_00038644_00043001 NA coding downstream 58824 38071 ~ 43028 (-)
CI01000158_00036387_00037400 NA coding downstream 64425 35917 ~ 37427 (-)
CI01000158_00029380_00034355 TAAR20T coding downstream 67137 28837 ~ 34715 (-)
CI01000158_00017507_00018520 NA coding downstream 83305 17011 ~ 18547 (-)
CI01000158_00113468_00114478 NA coding upstream 9948 112991 ~ 114505 (-)
CI01000158_00129735_00137154 NA coding upstream 26139 129182 ~ 137211 (-)
CI01000158_00161749_00163076 NA coding upstream 57944 160987 ~ 163158 (-)
CI01000158_00176124_00177494 NA coding upstream 71213 174256 ~ 177778 (-)
CI01000158_00184403_00186141 PCNA, MGC53867, PCNA.L coding upstream 80954 183997 ~ 187263 (-)
G363101 NA non-coding downstream 2635 98255 ~ 99217 (-)
G363094 NA non-coding downstream 19758 81849 ~ 82094 (-)
G363084 NA non-coding downstream 38553 63070 ~ 63299 (-)
G363076 NA non-coding downstream 47683 53936 ~ 54169 (-)
G363106 NA non-coding upstream 1859 104902 ~ 105200 (-)
G363807 NA non-coding upstream 142706 245749 ~ 246055 (-)
G363766 NA non-coding upstream 169042 272085 ~ 275673 (-)
G363771 NA non-coding upstream 188586 291629 ~ 292184 (-)
CI01000158_00286848_00307666 NA non-coding upstream 189527 286545 ~ 307666 (-)
CI01000158_00717478_00721819 STAMBPA, STAMBP other upstream 617003 717291 ~ 722084 (-)
G364103 NA other upstream 1353091 1452257 ~ 1501547 (-)
G364203 NA other upstream 1584923 1687966 ~ 1688828 (-)

Expression


Co-expression Network