CI01000158_00129735_00137154


Basic Information

Item Value
gene id CI01000158_00129735_00137154
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 129182 ~ 137211 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000158_00129735_00137154.mRNA
AGGGCCAGGCTACATATGAGGATATAATAAAATCTGGAAATGATTAACAGGAGCATCATGGAGGACAACAGTCAAGAAATCCAGTATTGCTTTCCAAACAACAGTTTGTCATGTTTCAAAGAAATCAAACATGAAGCGGAATACGTCATTTTGTACATTTTCGTTTTTTTAGCATCAGTGTTCACTGTGTTTCTGAACCTGCTGGTGATCATCTCCATCTCTCACTTCAAGCAGCTTCACACTCCAACTAACCTGCTCATCCTCTCTCTGGCTGTGGCTGACCTGATTGTGGGACTGATTGTTATACCATTTATGGGCATCACATTCATAGAATCATGCTGGTACTTTGGAGAGACATTCTGTTCTCTATATTTATTTATTGCTTTTATGGTTGTTTCAGCATCTCTTGGTAATTTAGTCTTTATATCTGTTGATCGTTACATTGCTGTGAGTGACCCTTTGAGATACACAGTAAGGGTCACAACTGATAAAGTTGTTTTTTGCAATTTTACAAACTGGCTGTGTTCAAGCATATATTCTGTCATTATCTTGTATAATACTATGTTCTACCCAGAGACACACGGCAGGTGTTATGGAGAATGTACAGTTTCTTTTAAATTTGAACATGTTGTCACAGACCTCATAGTCACTTTTGTCACACCTTCTTCTGTAGTCATGTCTATCTATGTGAAAATCTTCTGTGTTGCGAAACATCAGGCCAAGGTTGTAAATTCTGTCACAGCATCTCTTGGTAATTTAGTCTTTATATCTGTTGATCGTTACATTGCTGTGAGTGACCCTTTGAGATACACAGTAAGGGTCACAACTGATAAAGTTGTTTTTTGCAATTTTACAAACTGGCTGTGTTCAAGCATATATTCTGTCATTATCTTGTATAATACTATGTTCTACCCAGAGACACACGGCAGGTGTTATGGAGAATGTACAGTTTCTTTTAAATTTGAACATGTTGTCACAGACCTCATAGTCACTTTTGTCACACCTTCTTCTGTAGTCATGTCTATCTATGTGAAAATCTTCTGTGTTGCGAAACATCAGGCCAAGGTTGTAAATTCTGTCACAGGTGTCAGCAGGTCACAAAGAAAGGCAGCAAAAACTTTGGGTATTGTTGTAATGGTTTACTTTATGTGTTGGATACCATACTATATAGTCACTCTTATTGAAGGAAATGAGCCAACGGTTCAATTTAATGTTACATGCTGGATTTTGTACATGAATTCCTGTATGAATCCCCTTATCTATGCTCTGTTTTATAAATGGTTCCGATTATCAGCTAAACACATTGTGACTCTAAAAATATGTAAACCATCTTCAGAATACTTTAGCCTTTTCCCAGAGGATAAATAATTAAGGAATATTTTTTTAAGAATAATTTTAAAAGAGTTGCTTAAAGAGTTACTGATATATTCCTTATTGTTTTCTTGTACAGTATTAATTACTTTGTATTTTAGGATATTTTATGTTGTACATCAGCAAGTTAAGGTTATAAGCTCCCTGATGAAAATGCATACATAATATTCATAGAACCACAGCAAATAGGAGTTGTTGTTTTTTTTACATCAAGATTTTAAGTTATGTTTATGATTGTTTAAAAAATGTGTATGGTGTGCATTTCTTTTTTTACCTCTTTGTAGTTCACTTACTCCTAAATGGTGCCAAAATACAAATACAAATACATTATGTATCGTCTCAATGTGAAGTTATAGAATCTGTCTTTATAACGATTATATTAGAAAAATTATGTTTAACAGTTTTAAAAGTAGTATAGTATGTCACAGTTTGAAATTATGTCAACTACCCACATACTTGTGTACAAATGTTTGTTTAGTTTAACAAAGTTAATGTAATCAAACAATGGGCCAGACTTGTGCAAAAGTGGAAAAACATCAGTAAGAATAAA

Function

NR:

description
Taar9 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000158_00129735_00137154.mRNA True 1921 mRNA 0.34 2 129182 137211

Neighbor

gene id symbol gene type direction distance location
CI01000158_00113468_00114478 NA coding downstream 14677 112991 ~ 114505 (-)
CI01000158_00102003_00103016 NA coding downstream 26139 101852 ~ 103043 (-)
CI01000158_00047164_00048174 NA coding downstream 80829 46972 ~ 48353 (-)
CI01000158_00038644_00043001 NA coding downstream 86154 38071 ~ 43028 (-)
CI01000158_00036387_00037400 NA coding downstream 91755 35917 ~ 37427 (-)
CI01000158_00161749_00163076 NA coding upstream 23776 160987 ~ 163158 (-)
CI01000158_00176124_00177494 NA coding upstream 37045 174256 ~ 177778 (-)
CI01000158_00184403_00186141 PCNA, MGC53867, PCNA.L coding upstream 46786 183997 ~ 187263 (-)
CI01000158_00199362_00223636 BMP1B, BMP1A, BMP1 coding upstream 61646 198857 ~ 223636 (-)
CI01000158_00234248_00237084 NPFFR1L1 coding upstream 96566 233777 ~ 237084 (-)
G363106 NA non-coding downstream 23982 104902 ~ 105200 (-)
G363101 NA non-coding downstream 29965 98255 ~ 99217 (-)
G363094 NA non-coding downstream 47088 81849 ~ 82094 (-)
G363084 NA non-coding downstream 65883 63070 ~ 63299 (-)
G363076 NA non-coding downstream 75013 53936 ~ 54169 (-)
G363807 NA non-coding upstream 108538 245749 ~ 246055 (-)
G363766 NA non-coding upstream 134874 272085 ~ 275673 (-)
G363771 NA non-coding upstream 154418 291629 ~ 292184 (-)
CI01000158_00286848_00307666 NA non-coding upstream 155359 286545 ~ 307666 (-)
G363818 NA non-coding upstream 179577 316788 ~ 317127 (-)
CI01000158_00717478_00721819 STAMBPA, STAMBP other upstream 582835 717291 ~ 722084 (-)
G364103 NA other upstream 1318923 1452257 ~ 1501547 (-)
G364203 NA other upstream 1550755 1687966 ~ 1688828 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003020 taar16a coding NC_007121.7 CM002894.2 40593443 ~ 40594447 (-)