CI01000158_00453940_00462329


Basic Information

Item Value
gene id CI01000158_00453940_00462329
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 453444 ~ 462409 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000158_00453940_00462329.mRNA
AACGACACGTTTGAATATTAAGGCTTTTTGCTGCTCTATCTGACCGAACTGTAAAACTTCACGAGTTTGTGGGTGTCAATATGAGCTCCTCGCTTCCAAAAAGCGAATCCACCACATCCCTGATCAAAACGAACCGGAGAGTCCGCGCGGACCCCGCGAGTCAACGCAACGGTCACCGACACACGGGAGTCGGCGGCGGGGACTCGTGCTGGACCGAAGAGTGCGATGCCACCGCCCGCAGACCTCTTTGCCAACCGAAACACGGACGAAAAGCGGAGAAGATCCAGAATCCCCGAGGCCAGGATGGATATCATCAGGAGGATGGACTGGAACACCGCAAACCGTCACGGCACCACCACACCATTGACCCTCCGGTACAACTCCACGGGAATTCCCGCACCAGCCGGACGCCCTCCCCTTCTCCGTCCCTCTCCAAGCGCTCGGACGAAGCCGCGCTGTTCTTTGAAACGAAGGACAGGTATCGGACGGGCTCGAATCAAAGCCTCACCTCTAGTCCACCTCCAGCGCTTCAGCCCAGCAGCACGCGCGTCCACGGGAGAGCGAGCGCGTACAGCGGCGCGCTTGATGCAGACCTCCATCCCATTGTCAAATCAGTCTTTGGACAGTCGCTCGCATCCTTCCTCCCTGCTGGATCCAAACTAGGATGGAGGGATACAGGAGATGAGGATATGAAGGTGCAAGGAGGAAGAAAAAGGGGAAGCATAAGAGACTATTATGTGTTATGTAAGAAAGACACAACACTCAGTGTACGGAGGCAGGTGATGCAGAACCACTTTAGCTCTGCCTCTCACTCGCTTAGCTCCATTTGCACTCATTCTTTGGGCTTTTTCCGGAGCATTCAGTTGAACCCCGCCCTCCCTCTCCATCCCACTTGGGTCACACCGACCTTGCAAGGGTCTGAGGGGGGGAGAGATACAGAACAACAGGGAGGGCGGAAGGCAAACGGAGGGATAGTTGAAAGAATCAGGCTTAAACAGATGAGAGAAAAGAGGATATGTGAATAAGGGATACAAGCTGTGTCGTAAATTCCACGTCATTTCTGTCTTCCATACAATCTCAAAAGTCTGTGCTATTTATAGAAGCAAATGTGTGTTTTTTTTATTCGCCCATGGATTGCAGGGGAGGAAATGCAGAATTTCTAAGCCTTTCTCAGTATGTGTAGTTGAAAGAGAGAGAATAGACCTTGAAATTCCTTCCTCGGCACATCCCTGAGGAACATGTTATTGCTTAGAGATCTTTCATTGACTTTTTTTTTTTTTTTTAAATAAAAAGGTGATCCTCACAATGTTCAGGTCACATTTCACACGAAAATTAGGGAAACAATTAAATCATAAAATTATTTAAAATATTATGTTTTATAATTTTTTTTTTTTTTTAAGCTTTATTTATGAGTTTTAGGACAATATTACAAAGAAAGAAAACAAAAGACAAGATCAACTTAAATAGTAATACCTGTTTTATAAAATTATGACAGAAAAACATCAATATAAAAATAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000158_00453940_00462329.mRNA True 1521 mRNA 0.46 2 453444 462409

Neighbor

gene id symbol gene type direction distance location
CI01000158_00430123_00437063 CABP1 coding downstream 16381 430031 ~ 437063 (-)
CI01000158_00409330_00422508 GPAT4, PLCF coding downstream 30817 409133 ~ 422627 (-)
CI01000158_00387142_00400130 RAB11FIP1B coding downstream 53314 387142 ~ 400130 (-)
CI01000158_00372066_00382393 NA coding downstream 71051 371945 ~ 382393 (-)
CI01000158_00286848_00307666 NA coding downstream 145778 286545 ~ 307666 (-)
CI01000158_00522039_00535779 NA coding upstream 59336 521745 ~ 535804 (-)
CI01000158_00608301_00616686 NA coding upstream 145057 607466 ~ 616881 (-)
CI01000158_00618753_00629015 KDM2B coding upstream 156275 618684 ~ 629015 (-)
CI01000158_00638618_00641457 MORN3 coding upstream 176106 638515 ~ 641457 (-)
CI01000158_00651772_00657903 RHOF coding upstream 187926 650335 ~ 658338 (-)
G363832 NA non-coding downstream 83079 369377 ~ 370365 (-)
G363831 NA non-coding downstream 91851 361333 ~ 361593 (-)
G363829 NA non-coding downstream 98148 355042 ~ 355296 (-)
G363819 NA non-coding downstream 122917 330313 ~ 330527 (-)
G363818 NA non-coding downstream 136317 316788 ~ 317127 (-)
G363844 NA non-coding upstream 17552 479961 ~ 480422 (-)
G363775 NA non-coding upstream 53778 516187 ~ 516652 (-)
G363858 NA non-coding upstream 56277 518686 ~ 519093 (-)
G363877 NA non-coding upstream 113782 576191 ~ 576390 (-)
G363878 NA non-coding upstream 114289 576698 ~ 576968 (-)
CI01000158_00717478_00721819 STAMBPA, STAMBP other upstream 257637 717291 ~ 722084 (-)
G364103 NA other upstream 993725 1452257 ~ 1501547 (-)
G364203 NA other upstream 1225557 1687966 ~ 1688828 (-)

Expression


Co-expression Network