G379570


Basic Information

Item Value
gene id G379570
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 760546 ~ 764103 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU433926
TTTTGTTTTTTTTTTGCTCACTTTCATATACGATTTATTTTTTTTGTGTAAAAAGAGTAAGTACAAAGCAAAAACAAAACTCTTAAAGGAGTTTATGAAACTCGTTGATCTGACAGTCTGTAGAAATAGACAATCCCCACAAACATATACAATCCACTCTATATTATAGAGTTCAAATTCTAATCCACGTCTGTATTCCCACTGCCCAAGGCCCCTATAAAACAAAAACTCCCGTCAAGCATAATATGTACATCATCCCAGTGATCGAGAAGCTCACTAAGACCAAACTGCGGCCATGCTGAAATGTGGAAATGTTTTCAAGAAAAAAAAAAAAGGGGGGGAGGGGGGTTGGGGCTATCCAAGAATGGCCCTAGAATTGCTGGGAAGGAAGGGTGTGTGAAGAGATATTAGTTAGTCCAAATAGTCAGGAATGTAGCCAGTACAAAATATACAATGCTTGATTGTTGGCACAAAAAACAGGAATGATTAAGGAAAAAAATTGGAGGGCTTTTCTTTTTTGTGATCTTAAAAACTCCTCGGCTTTGGTTTGTTCAAGTGTCCAGTGACCAAAGAATAGACAGCTTGAGAGGGGCGCAGATTGCTTTCCCACACTCTGAATAGAGCCTCACTCCTTCACCCGGCTCACCCCTTCACTCTCTTTTCTTCCATAAGTGGAGGAGAAAAGTTTCTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU433926 True 693 lncRNA 0.40 2 760546 764103

Neighbor

gene id symbol gene type direction distance location
CI01000189_00693840_00694391 TRNP1 coding upstream 64579 693701 ~ 695967 (+)
CI01000189_00671005_00685458 RPS6KA1, RPS6KA2 coding upstream 74275 671005 ~ 686271 (+)
CI01000189_00613239_00646678 NA coding upstream 113598 611599 ~ 646948 (+)
CI01000189_00552262_00553370 NA coding upstream 207060 550833 ~ 553486 (+)
CI01000189_00537167_00546397 NA coding upstream 213239 537167 ~ 547307 (+)
CI01000189_00877464_00886363 VGLL2B coding downstream 113361 877464 ~ 886915 (+)
CI01000189_00893376_00898271 CTSL.1 coding downstream 129273 893376 ~ 898402 (+)
CI01000189_00968023_00981490 PACRG coding downstream 203920 968023 ~ 981814 (+)
CI01000189_00987665_01058757 PACRG coding downstream 223422 987525 ~ 1059385 (+)
CI01000189_01068817_01136608 QKI, QKIA coding downstream 304714 1068817 ~ 1136608 (+)
G379582 NA non-coding upstream 143068 616592 ~ 617478 (+)
G379627 NA non-coding upstream 181227 578385 ~ 579319 (+)
G379599 NA non-coding upstream 286522 473810 ~ 474024 (+)
G379592 NA non-coding upstream 300115 459307 ~ 460431 (+)
G379561 NA non-coding upstream 344498 415750 ~ 416048 (+)
G379695 NA non-coding downstream 31086 795189 ~ 795509 (+)
G379700 NA non-coding downstream 78284 842387 ~ 852067 (+)
G379780 NA non-coding downstream 210962 975065 ~ 976610 (+)
G379786 NA non-coding downstream 230746 994849 ~ 995109 (+)
G379660 NA non-coding downstream 332482 1096585 ~ 1107177 (+)
G379600 NA other upstream 263638 475615 ~ 496908 (+)
G379799 NA other downstream 248443 1012546 ~ 1012903 (+)
G381120 NA other downstream 2075118 2839221 ~ 2841125 (+)
G381491 NA other downstream 2861633 3625736 ~ 3626855 (+)
G381655 NA other downstream 3356284 4120387 ~ 4122344 (+)

Expression


Co-expression Network