CI01000193_00074853_00078832


Basic Information

Item Value
gene id CI01000193_00074853_00078832
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000193
NCBI id null
chromosome length 643562
location 74449 ~ 78947 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000193_00074853_00078832.mRNA
AGTGCCACCTTTTGGTGGGACCAATGTAAGTGATTTCATTGCAGGTGTCGATCCTGCTCAGTTGAGTTGAAGGAGCATCATCGAGAAGAACAACACATCAAAAACATTCAATAGTATGTGGGCTTTCATCTTATATTTCATCTGTGCGGAGGTGTGTGGAGAGGTTGATGACACTGAAACAGTGAAAGTGAAAGAGGGAGGTTTCCTCAATCTGAATCCGGGACTTCATGATCCTAACGGAGACGTTCAGATACTGTGGACGTTTGAAAGCGGCAGACAAAGTACTCGTGTCGCACAGATGCATCAAGGAAAAATATACACTCATTATGACAAGAGACTCACTGGCAGAGTGCAGCTAGACCAAGAGACAGGGATTTTAACCATTACTGACATCAGAACTAATGAATCTGGACTGTATAAAGCATTAATCGTCATCAATACACACATCTCAGGACGGAGGTACAAAGTTGATGTTTATGGTACATCAGAGGAAATATGCTCTGTGCTTTGCTCTGTGAGAAATGATCGAGACATGTTCATCTCATGGTATAAAGGGGGTGAAATTGTGAATCAAACCAGCAATCCTGATCTCAGCATCAACCTCAGTTTACCATTAGAGCTTCATTATGATGATTCAGAGATCTACAGCTATTGTCTGGATCATTGTGGCGTCACTGAAGCTCTGATTCGACTGGTTCTGTCTGGTCTGGTTGGAATCGCCACTGTTTTCTTTCTGGTTGAACATGTGAGGATCTGCTCAGTTCAGAGAAGAGCTGCTGCTTCTGTGTGATGATGATACTTTTGTGAGATTTAGTGTAATTGCCTTCTCTTGTTTCACTCTTAAAAAGATTCCTTGGTTCTGCTGTATTTTATACCAGTTTCTATCTAACAAAAACAACAAATAAGCTCTGCAATATATATATATATATATATATATATATATATTTTTTTTTTTATTATGTTGAATCAATATGAATGAATCAACCTGAATACATTAAGTTAAATCATAATAGTTCCTTAATTCATTGGTTAACCAGTGTTTAACTGGTAATAGTGTGCATACTATTGCCGCACTTTTTTATTTAATTATTACAAATAGGGACACTAATATGAATCTGATAATTTCTGAATTAAGTGTTAAATTGTGTTAAGTTACAGAATGTAAAGTTAAAATTATAGGTGATTAAAAATAAA

Function

NR:

description
Si:ch211-222k6.3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000193_00074853_00078832.mRNA True 1194 mRNA 0.37 4 74449 78947

Neighbor

gene id symbol gene type direction distance location
CI01000193_00063306_00069976 NA coding downstream 4447 63030 ~ 70002 (-)
CI01000193_00041435_00048207 NA coding downstream 24878 41097 ~ 49571 (-)
CI01000193_00088221_00095804 TGM2A coding upstream 9005 87952 ~ 96447 (-)
CI01000193_00099572_00117203 NA coding upstream 20524 99471 ~ 118721 (-)
CI01000193_00127434_00155049 NA coding upstream 48011 126958 ~ 155262 (-)
CI01000193_00289289_00334600 SLC1A7A, SLC1A7B, SLC1A7 coding upstream 208395 287342 ~ 334600 (-)
CI01000193_00380544_00386196 GPX7 coding upstream 301348 380295 ~ 386196 (-)
G384555 NA non-coding downstream 42867 30418 ~ 31582 (-)
G384613 NA non-coding upstream 196292 275239 ~ 276871 (-)
G384662 NA non-coding upstream 308906 387853 ~ 393121 (-)
G384669 NA non-coding upstream 356992 435939 ~ 441404 (-)
G384676 NA non-coding upstream 371488 450435 ~ 450761 (-)
G384715 NA non-coding upstream 445510 524457 ~ 524757 (-)
G384658 NA other upstream 310663 389610 ~ 429293 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021983 CR545469.2 non-coding NC_007134.7 CM002907.2 43288994 ~ 43294959 (+)