CI01000299_04242809_04251680 (ARGLU1)


Basic Information

Item Value
gene id CI01000299_04242809_04251680
gene name ARGLU1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4242197 ~ 4251865 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_04242809_04251680.mRNA
ACGTTGTTATTAAACACTTTATTTCCAAATAAGACTTTCGTGTTCAAGATTATTGTCATGCAGTCGCGACTGATTCCTTAAGTGTGTAATTTGGGTCTTGTTTCAAAGGCGATCAGGTGCTTCTCCGATGTTTTAGAGGTGTTCAGTATCCTGACTACTGCTACTGAACTCTGACGGCGTTTGAAATGGGTCGTTCGCGGAGCCGCAGCTCTTCCCGCTCCAAGCACTCCAAAAACAGTAAGCACAGTAAAAAGCGAAGCCGCTCGCGATCGAGGTCCCGGGACAAAGAGAGGAAGAGGCGCTCGAAGTCCCGAGAGTCCAAAAGGAGTCGGAAGAGAGAATCGCGCTCTCGTTCCAAATCGAACACGGCCACGTCTCGCCGGGAAAGGGAGAGAGCTGCCTCGCCGCCTGAGAGAATTGACATTTTCGGCAGGGCGATAAGTAAGAGGAGTGCTGTAGACGAGAAGCAGAAGAAAGAGGAAGAAGAGAAGAGAGCCGAAATGGAAAGACAGAGGAGAATTCGACAGCAGGAGATCGAGGAGCGGCTGATTGAGGAGGAGACGGCGCGGCGCGTAGAGGAACTCGTTGCCAAACGTGTGGAGGAGGAACTGGAGAAGCGAAAGGACGAGATTGAAAGAGAAGTGTTGCGACGGGTGGAGGAGGCCAAACGCATCATGGAGAAGCAGTTGCTAGAGGAGCTGGAGAGACAGAGACATGCGGAGCTGGCTGCTCAGAAAGCTCGGGAGGAGGAAGAGAAATCAAAGCGTGAAGAACTGGAGAAAATTCTGGTGGAGAACAATCGCAAGATAGCCGATGCTCAAGCTAAACTGGCAGAGGAACAACTACGAATAGTTGAAGAGCAGAGAAAAATACACGAGGAGCGAATGAAGTTGGAGCAAGAGCGACAGAAACAGCAGAAAGAAGAACAGAAGATCATTTTGGGGAAAGGGAAGTCGAGGCCGAAACTGTCTTTCTCTTTCAAGGCCACTGAGTGATGAAAACAATATGGCCAGGATTGCTCCAGACTTTCTCCAGACCACCTCTCCGCGTGAGGCATTTGTGCTGCAGCACAAGTTCTTCTTCATAGGTCTTGTGTGGTGTGTTTCAAATTCTCAGAACAACGGGAACAAACAGTTTGTCAAATTTCCTTCAGTCCCAACCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTACCTGTCTGTTTTGTATTGCTGACTCTTGTATAGATAACCTCCACTTGTCCTCCGTGTAGTATCTGCAAACACATTTGGAGCATTGCACAGGTAGGGTTAAAAAAGGACCAGCCTGACCTGCTTTCTCATCCAAATGGTTTCCGGTTTCACTAATTCAAGACCTCAACAGATTTTCCTGGCTGATTCAATTGAAGTATTTTTATTTTTTTAATAGTTTATTCATAGTATAAAGTAATTAGAATGCAAGATTGGCAGGGAAAGTGCTTGAACTGGAAGTCCATCCCTCTATTTTGAATGGCACAGACCACTATGATTTGAACCAAGAAGCATCATAAAACAAGAGTATCCTCCTTTTATCATTTTTACTTACACTTTAATAATTGTACATTCAAGAGGTAAAGTGATGCTGTAATAAA

Function

symbol description
arglu1 Enables cadherin binding activity. Located in cytosol; mitochondrion; and nucleoplasm.

GO: NA

KEGG:

id description
K13173 ARGLU1; arginine and glutamate-rich protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_04242809_04251680.mRNA True 1607 mRNA 0.47 4 4242197 4251865

Neighbor

gene id symbol gene type direction distance location
CI01000299_04227918_04239792 EFNB2B coding downstream 2405 4227520 ~ 4239792 (-)
CI01000299_04186183_04196219 MX1, MXB, MXA coding downstream 44313 4184967 ~ 4197884 (-)
CI01000299_04171373_04175441 NA coding downstream 66756 4171149 ~ 4175441 (-)
CI01000299_04158468_04164223 MX2, MX1, MXB, MX, MXA coding downstream 77482 4158001 ~ 4164715 (-)
CI01000299_04136702_04142005 NA coding downstream 100072 4134820 ~ 4142125 (-)
CI01000299_04370401_04385955 RADIL coding upstream 118536 4370401 ~ 4388020 (-)
CI01000299_04398464_04403711 NA coding upstream 144609 4393404 ~ 4403711 (-)
CI01000299_04456420_04468754 NA coding upstream 204364 4456229 ~ 4469450 (-)
CI01000299_04587880_04594059 ATP1A1A.4, ATP1A1A.5, ATP1A1A.3, ATP1A1 coding upstream 335929 4587794 ~ 4594120 (-)
CI01000299_04603421_04609353 ATP1A1A.4, ATP1A1A.2, ATP1A1A.3, ATP1A1 coding upstream 351526 4603391 ~ 4609353 (-)
G407330 NA non-coding downstream 34043 4207797 ~ 4208154 (-)
G407296 NA non-coding downstream 62570 4156825 ~ 4179627 (-)
G407318 NA non-coding downstream 112977 4129003 ~ 4129220 (-)
G407288 NA non-coding downstream 114557 4121679 ~ 4127640 (-)
G407306 NA non-coding downstream 175549 4066205 ~ 4066648 (-)
G407340 NA non-coding upstream 7617 4259482 ~ 4263461 (-)
G407343 NA non-coding upstream 14489 4266354 ~ 4266553 (-)
G407344 NA non-coding upstream 15354 4267219 ~ 4267442 (-)
G407348 NA non-coding upstream 20047 4271912 ~ 4272172 (-)
G407352 NA non-coding upstream 29299 4281164 ~ 4281377 (-)
G405053 NA other downstream 2224147 2017687 ~ 2018050 (-)
G404976 NA other downstream 2361209 1855639 ~ 1880988 (-)
G404784 NA other downstream 2582197 1659655 ~ 1660000 (-)
G404372 NA other downstream 3166306 1070607 ~ 1075891 (-)
G407413 NA other upstream 224129 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 674103 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 1189472 5427661 ~ 5443433 (-)
G407805 NA other upstream 1575971 5835889 ~ 5835989 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location