G407406


Basic Information

Item Value
gene id G407406
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4455446 ~ 4455680 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU468089
ATCTAATACAGCCATGAGTCTTTTTGGGAAAGATGCAACAAGTTTTTCCCACCTGGATTTGGGGATCCTCTGCCATTCCTCCTTGCAGATCCTCTCCAGTTCTGTCAGGTTGGATGGTAAACGTTGGTGGACAGCCATTTTTAGGTCTCTCCAGAGATGCTCAATTGGGTTTAAGTCAGGGCTCTGGCTGGGCCATTCAAGAACAGTCACGGAGTCGTTGTGAAGCCACTCCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU468089 True 235 lncRNA 0.49 1 4455446 4455680

Neighbor

gene id symbol gene type direction distance location
CI01000299_04398464_04403711 NA coding downstream 51735 4393404 ~ 4403711 (-)
CI01000299_04370401_04385955 RADIL coding downstream 67426 4370401 ~ 4388020 (-)
CI01000299_04242809_04251680 ARGLU1 coding downstream 203581 4242197 ~ 4251865 (-)
CI01000299_04227918_04239792 EFNB2B coding downstream 215654 4227520 ~ 4239792 (-)
CI01000299_04186183_04196219 MX1, MXB, MXA coding downstream 257562 4184967 ~ 4197884 (-)
CI01000299_04456420_04468754 NA coding upstream 549 4456229 ~ 4469450 (-)
CI01000299_04587880_04594059 ATP1A1A.4, ATP1A1A.5, ATP1A1A.3, ATP1A1 coding upstream 132114 4587794 ~ 4594120 (-)
CI01000299_04603421_04609353 ATP1A1A.4, ATP1A1A.2, ATP1A1A.3, ATP1A1 coding upstream 147711 4603391 ~ 4609353 (-)
CI01000299_04645836_04651938 ATP1A1A.4, ATP1A1B, ATP1A1, ATP1A1A.1 coding upstream 189959 4645639 ~ 4651938 (-)
CI01000299_04658984_04668843 ATP1A1A.4, ATP1A1 coding upstream 203215 4658895 ~ 4669022 (-)
G407359 NA non-coding downstream 42044 4410503 ~ 4413402 (-)
G407397 NA non-coding downstream 93208 4362007 ~ 4362238 (-)
G407387 NA non-coding downstream 105682 4349523 ~ 4349764 (-)
G407352 NA non-coding downstream 174069 4281164 ~ 4281377 (-)
G407408 NA non-coding upstream 11138 4466818 ~ 4467020 (-)
G407409 NA non-coding upstream 14332 4470012 ~ 4470215 (-)
G407414 NA non-coding upstream 23309 4478989 ~ 4554077 (-)
G407416 NA non-coding upstream 25189 4480869 ~ 4481664 (-)
G405053 NA other downstream 2437396 2017687 ~ 2018050 (-)
G404976 NA other downstream 2574458 1855639 ~ 1880988 (-)
G404784 NA other downstream 2795446 1659655 ~ 1660000 (-)
G404372 NA other downstream 3379555 1070607 ~ 1075891 (-)
G407413 NA other upstream 20314 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 470288 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 985657 5427661 ~ 5443433 (-)
G407805 NA other upstream 1372156 5835889 ~ 5835989 (-)

Expression


Co-expression Network