CI01000304_10512196_10516865


Basic Information

Item Value
gene id CI01000304_10512196_10516865
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10511523 ~ 10516916 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10512196_10516865.mRNA
CTTTAAAATTATCCAGTGTTTCTATAGATTCCATACACAAATTTTGATATTATAAGATATTAAATTTACATCCATAAGCACACCCATTCATGCACACAATATAGTGGAAAAGTGGCTTTCATTATAGTTTAAACTTAAAATATCTGTATTGCTAAATAGCCTAGTCATTTTTTATATAGAAGTTTACTTTACAGATGGTTCTAAACTTAAAGTCACCATGAATACACACATGATTTATACCACACCCATTTTTTTTTTTTTTTTTTTTAATGCATGTGTCCTCAATCTTTAATCAAAATAGCTTCCCCTCCCTCTTACAGCAACATCTCTTCTCTGATGACGTGTTTACTGGCGTGAGGAGGGAAAACCTGTCACTCACATGACGTCACAGCAATAGCAAACCATCCAATCAATTCCCGATAGACAAAATCAAGTCCCGGCCTACATTTTTTCTTGCTTGAGAAGCTGTTTCTCTTGGATATACATCACTATAAGGAAGAAAAGACTATTGCAACAGCCAACTGATCGGATGTCACATGTTTTTGTGTTCACACGCTGACCACAAATTTGTTTGCCACTAATGTTAAAAATAAGACAAGTGCTGACTACTTAAACACATCTACACAGGAACAAGGAACTAAATTGTTTAATGTTTGATGGTTAAAGAGCAGAAATGTCTTATAATATTTATGACAACGTAATCAGGATTGTACCTGAGGCAATGAAGACAGAGAGAGCAGAGATGACGGAGGTTATCTATGAGAGTTCAGATTGTGTGGGAGATCATGACTTCAGGATAGAGACAAACACACACCAACTACTTCAGTGTAAAGGAAGTGATCCTGTGAGGATCAGAAGCTCCAGAGCAGCTCTAGTGTGTTTGGTGCTGCTGTGTGTTCTTCTGCTGACTGCAGTCATAGTGCTGTGTGTCTACATCCATACAAAGAGCACAAACTACACAGAAGAGAGAGACCAGCTACTAAACAAGATTACCAACCTCACCAAAGAGAGAGATGGGCTAATAATAAAGAACAAAAACCTGAATGAGAGAGACCAGCTAGGAAATGAAGTTCCGATTTATGTCTGGATTGGTCTGACTGACAGTGTTGTGGAGGACAGGTGGAAGTGGGTTGATGGCATCGCACTGACCTCTGGGTTCTGGGCGTCTAAAGAGCCTAATGGAGGTACAAGTGAGAACTGTGCTGTGAATGTGGCTGTGCCTAAATTGCCAGAGTGGCCTGGTTTAGTAGGGTGGATTGATGAATCATGTAATAAAGCTTATCAATGGATCTGTGAAAAGAATATTTCACAACTCATGCTGCCATAGGAACATAATACATCTTTTTTGATGCAAATTTAACAGAACAAAACTTTTGTA

Function

NR:

description
CD209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10512196_10516865.mRNA True 1378 mRNA 0.38 4 10511523 10516916

Neighbor

gene id symbol gene type direction distance location
CI01000304_10504058_10505899 NA coding upstream 5507 10502988 ~ 10506016 (+)
CI01000304_10489464_10500854 NA coding upstream 10386 10489381 ~ 10501137 (+)
CI01000304_10473174_10473651 NA coding upstream 37798 10472092 ~ 10473725 (+)
CI01000304_10451536_10470518 CD209 coding upstream 40268 10450410 ~ 10471255 (+)
CI01000304_10327313_10328936 NA coding upstream 182131 10327261 ~ 10329392 (+)
CI01000304_10528999_10530630 NA coding downstream 11576 10525290 ~ 10530847 (+)
CI01000304_10541900_10546151 NA coding downstream 23211 10535842 ~ 10546209 (+)
CI01000304_10550477_10551812 NA coding downstream 33352 10550268 ~ 10552740 (+)
CI01000304_10555326_10571933 NA coding downstream 38300 10555216 ~ 10572164 (+)
CI01000304_10577811_10579298 NA coding downstream 60785 10577701 ~ 10580537 (+)
G424376 NA non-coding upstream 258251 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 268310 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 290408 10219120 ~ 10221115 (+)
G424248 NA non-coding upstream 294668 10153444 ~ 10216855 (+)
G424547 NA non-coding downstream 15330 10532246 ~ 10543770 (+)
G424790 NA non-coding downstream 320269 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 333394 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 547602 11064518 ~ 11065557 (+)
G424251 NA other upstream 318628 10188822 ~ 10189404 (+)
G424246 NA other upstream 384201 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 945950 9561005 ~ 9565778 (+)
G423614 NA other upstream 1562101 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1838968 8671770 ~ 8672555 (+)
G425718 NA other downstream 1911789 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3039535 13578049 ~ 13595097 (+)
G426312 NA other downstream 3813132 14330048 ~ 14330886 (+)
G426828 NA other downstream 4431974 14948890 ~ 14950592 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002763 NA non-coding NC_007121.7 CM002894.2 23548976 ~ 23549882 (-)