CI01000304_10528999_10530630


Basic Information

Item Value
gene id CI01000304_10528999_10530630
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10525290 ~ 10530847 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10528999_10530630.mRNA
ATATAAAACACGTATCAAAACGAACTGGCAAGAGACACACACTCACGTCAAAATGGCGTCGGTACAGGGTCAAAGACAAAAATCTAAATAAAAGTCTTTAAACAACGAAGAGTGGAATCAACATACATTACACAGACAAAAAAAGAAATACATCTCTAATACAATAATAAGGATTTTAGTAAAAAATCAATATTAACAAACATACAATGAAAGAACACTGATGTCAAGAAAAATTCAGTTAAATTTTCTGGTCAATTTAAGTTCACTGGATCTCGTATAATTTTACTGTACTAATTTGAACCTAGCTGCTACATATAATCACCACAATAGTGCCCTTTTCGTTATGTTGGTATTAACAGACAGGATGTCACATGCTCTTGTACTGTGACATACTTTGCTACACATTCACCTCATGTACTAAAATTAGAGTCTTAAAAGGAGAGGACTACAGAGTACATTTGTACACAGACAGTTTCTGCCATTTACGTACATTACGGGCAAGCGAGAATGTCTCAGCCTGTTTATGGCAACATAAACACTGGTGGATCATGTGGTATGAACCGACGCACCAAGGGAAACCAAACACTTCGAGACACAGGAAGTGACTCTGTGAGGATCAGAAGCTCCAGAGCAGCTCTAGTGTGTTTGGTGCTGCTGTGTGTTCTTCTGCTGACTGCAGTCATAGTGCTGTGTGTCTACATCCATACAAACAACAGCACAAACTACACAGAAGAGAGAGACCAGCTACTAACTAACATCACCAACCTCATAGAAGAGAGAGACCAGCTACTAACTAACATCACCAGCTTCATAGAAGAGAGAGACCAGCTACTAAACAAGATTACCAACCTCACTGAAGGGAGAGATGGGCTAATAATAAAGAACAAAAATCTGAATGAGAGAAATGAACAGCTAATAAATGAATGTCGGATTTGTGCTGGATGGACTTGCTATCAATCCAGTCTTTACTACATATCCAATGAGAAGAAGAGCTGGACTGAAAGCAGACGATACTGTACAGAGAGAGGAGCAGATCTGATCACCATAAACAACAGAGAGGAACAAGATTTTGTTAATAACATGTCTGGTGATGCTGTAGTCTGGATTGGTCTGACTGACAGTGATGTGGAGGGCACATGGAAATGGGTTGATGGCAGCGCACTGACCTCTGGGTTCTGGGCGACTAATGAGCCTAATGGAGGTAGAGCAGAGAACTGTGCTGTGACTGTGGCTGTGCCTAAATTGCCAGAGTGGCCTGGTTTAGTAGGATGGATTGATGTTGCATGTAATAAAGCTTATCAATGGATCTGTGAGAAGAATATTTCACAACTCATACTGCCATAGGAACATCATGCATCTTTTGATGCAAGTTTAACAGTACAAAACTTTTGTAATAATTGACTGCACAACTGCACATTTTGAATGTCTCTTTTGTCAGACACTCATTTCATGTCCTGGAGTTTCTTGTAATGAGCTGATGAGTTGAATTTGATGTCTGTTTAATTAGGGAGATATAATATATATATATATATATATATATATATATGAGTGCCACAAAATA

Function

NR:

description
CD209

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10528999_10530630.mRNA False 1561 mRNA 0.39 5 10528492 10530847

Neighbor

gene id symbol gene type direction distance location
CI01000304_10512196_10516865 NA coding upstream 11576 10511523 ~ 10516916 (+)
CI01000304_10504058_10505899 NA coding upstream 22476 10502988 ~ 10506016 (+)
CI01000304_10489464_10500854 NA coding upstream 27355 10489381 ~ 10501137 (+)
CI01000304_10473174_10473651 NA coding upstream 54767 10472092 ~ 10473725 (+)
CI01000304_10451536_10470518 CD209 coding upstream 57237 10450410 ~ 10471255 (+)
CI01000304_10541900_10546151 NA coding downstream 9280 10535842 ~ 10546209 (+)
CI01000304_10550477_10551812 NA coding downstream 19421 10550268 ~ 10552740 (+)
CI01000304_10555326_10571933 NA coding downstream 24369 10555216 ~ 10572164 (+)
CI01000304_10577811_10579298 NA coding downstream 46854 10577701 ~ 10580537 (+)
CI01000304_10586097_10589143 NA coding downstream 54501 10585348 ~ 10589608 (+)
G424376 NA non-coding upstream 275220 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 285279 10242979 ~ 10243213 (+)
G424351 NA non-coding upstream 307377 10219120 ~ 10221115 (+)
G424248 NA non-coding upstream 311637 10153444 ~ 10216855 (+)
G424547 NA non-coding downstream 1399 10532246 ~ 10543770 (+)
G424790 NA non-coding downstream 306338 10837185 ~ 10837475 (+)
G424794 NA non-coding downstream 319463 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 533671 11064518 ~ 11065557 (+)
G425052 NA non-coding downstream 535645 11066492 ~ 11072156 (+)
G424251 NA other upstream 335597 10188822 ~ 10189404 (+)
G424246 NA other upstream 401170 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 962919 9561005 ~ 9565778 (+)
G423614 NA other upstream 1579070 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1855937 8671770 ~ 8672555 (+)
G425718 NA other downstream 1897858 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3025604 13578049 ~ 13595097 (+)
G426312 NA other downstream 3799201 14330048 ~ 14330886 (+)
G426828 NA other downstream 4418043 14948890 ~ 14950592 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002123 si:ch73-122g19.1 coding NC_007121.7 CM002894.2 23441488 ~ 23443074 (+)