CI01000304_16433456_16438415


Basic Information

Item Value
gene id CI01000304_16433456_16438415
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 16432429 ~ 16438531 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_16433456_16438415.mRNA
CTTTAAAAAGCGTCAGAGATCATACATACGGCCTGACTTCACCCCTTGTGATCCCGTGTGACATTTCTTAACCTTGTGACTCTAGTCCCAGGCTGAGTTGGACTAGTCTCCTGTCTAGTGTGAGAACTCACAGGAGGGAAATAAGGTGAATGTGCTAATTCTAATAATTACGTTTACACCAAATGCAACTGAATAATTTCTCTAGTTTCATTTCCTCGCTTCATGGCCTCGCCTTAGGATCAGGTGGAATCAGGTTTGTGATGAGGAGACAGATGTTGAGATCGTGTGGTGTCGATGTTGTCCAACACATCTGGGGATTAAGGGCGGATGAAGTACATTTCAGAAAACAATGACCAATGTGATTGTCCTCAGATTGCTACAGCCCTCACGGTCGATTAAAACCCCATCTGCAGAGTGGCGACCTGTCAGTTAATATAGGACATCAGCACCTCAGAACCTCTTTCTCCCTCCATTTTATTGATTTCTTTATCTTGTCAGAATGAACAATGTCAGTAAGAGAGTGTGAAAAGCAGTTTTATTTTTTTAAAGGGGGTTATTATTTTAAATATCTTTCAAATGAAGAAGAAATAACTCTGTGCACAAAGGATTAGGGTTACAAATGGTGAAACCAAACCCATGCATGCCTCATTTACAGACCCAGTTGAGTAATATCTGTTAATTCCAGGCTCTGTGAGGGGTTGTGTGTGAAATTTGGGGTAGCGGTAAAGCTACAGCAGGGGACATCCATTGCCTGGAACTCAACGAATTTTGAGTCAGGCAGAGGTCGCAAAAATGGCCCCACTTTCCCTTAATACCATTTACCCTTACCATCACTCTCAACAAACAGCAAACATGGAAACATTATGCTCTTGAACAAAACCGTGAAACATTATGCTCTTAAAATCTAGTCAGATGTTTTGTTTGTAATCACAGTTGGGTCTCTTTAACATCTCAGTTCTTTCTCCTAGAAAGGAAATAGAGAGAAAATGAGATGTTACAGTAAACCTTTATGATTTAAAACCAGCAAATGACTGTGTTGTTTGTGTACTTAACATCTAAAATGGTGAGCGAGCCGCAGAGGGCCAAACGCATCCAGCCTTGCACACCGTCCAGCCATCTGCAGGCAAAACAGATAACGGGTCTGTCCTCCCCCAACCCCTGGGTCGAGAAAATAGCCGTTTGCGACCAGGTCACGGTGGGGGTGACAATGAATTCAAACTTACCAGGAGGTTTTGGCACTGTTGTGATTGACAGTGTCAGGCGTCAGACTGCACAGACATTAGCTCAAGTGAAAGGTCATTCCGCACCAGATCCTCTCTGTCCCATGTCTCAGAAACCAGCAGAGGTAGAGAACATGTTCTCCACTCCCTCCTCTGAGTTAAATTTAGCTCTTGCCTGCTGTAGTGTGGAGCAGATGCACATGAGGGAGAGATATTGAAGTGTTGTAAAGACAAGAGAGAGCGTTTGTTCTGCTCCTGGTGTTATTAGGTTGATGGTTACTGGACGTCAGGTGCTCTGACTGGTCTGTGCTGGTCCTGCATTGATCATGCCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_16433456_16438415.mRNA True 1554 mRNA 0.44 5 16432429 16438531

Neighbor

gene id symbol gene type direction distance location
CI01000304_16406577_16413911 KL coding upstream 18206 16406067 ~ 16414223 (+)
CI01000304_16370076_16401491 FRY, FRYB coding upstream 30815 16369970 ~ 16401614 (+)
CI01000304_16358266_16367985 FRY, FRYB coding upstream 64089 16358266 ~ 16368340 (+)
CI01000304_16347460_16350144 NA coding upstream 82244 16346776 ~ 16350185 (+)
CI01000304_16315830_16336387 RXFP2A coding upstream 95501 16315168 ~ 16336928 (+)
CI01000304_16458657_16462430 NA coding downstream 19989 16458520 ~ 16463023 (+)
CI01000304_16470293_16490666 STARD13, STARD13A coding downstream 31722 16470253 ~ 16492041 (+)
CI01000304_16505174_16506124 NA coding downstream 66233 16504764 ~ 16513625 (+)
CI01000304_16565077_16641637 NBEA, NBEAA coding downstream 126546 16565077 ~ 16642341 (+)
CI01000304_16740135_16740524 SERTM1 coding downstream 300315 16738846 ~ 16740995 (+)
G428069 NA non-coding upstream 9480 16422747 ~ 16422949 (+)
G427866 NA non-coding upstream 212021 16220030 ~ 16220408 (+)
G427868 NA non-coding upstream 212492 16218447 ~ 16219937 (+)
G428027 NA non-coding upstream 302349 16129707 ~ 16130080 (+)
G427864 NA non-coding upstream 334936 16091400 ~ 16097493 (+)
G428099 NA non-coding downstream 36691 16475222 ~ 16555622 (+)
G428116 NA non-coding downstream 211361 16649892 ~ 16654939 (+)
G428188 NA non-coding downstream 293076 16731607 ~ 16731828 (+)
G428197 NA non-coding downstream 340832 16779363 ~ 16780995 (+)
G428201 NA non-coding downstream 353762 16792293 ~ 16792623 (+)
G428017 NA other upstream 348715 16083230 ~ 16083714 (+)
G427860 NA other upstream 542838 15885454 ~ 15889591 (+)
G426828 NA other upstream 1481837 14948890 ~ 14950592 (+)
G426312 NA other upstream 2101543 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 2853582 13578049 ~ 13595097 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 317415 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 572199 17009769 ~ 17023882 (+)
CI01000304_17315088_17315342 NA other downstream 876307 17315087 ~ 17315600 (+)
G429050 NA other downstream 1243740 17682271 ~ 17684763 (+)

Expression


Co-expression Network