G418047


Basic Information

Item Value
gene id G418047
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 440584 ~ 440872 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480207
GACGGCGGGTTAGGACCCTGTATCGATTATCGTGGACTAAATGACATCACCGTCAAGTTCCGGTACCCCTTGCCTCTAGTTCCTCCAGCCCTCGAACAACTCAGGCAGGCCGCATACTTTACCAAGTTGGACCTTCGCTGTGCGTACAATCTAATCCGCATCAGAGAAGGGGACGAATGGAAGACAGCCTTTTCCACAACCACTGGTCACTACGAGACCCTCGTCATGCCGTTCGGGCTGGCCAACAGTCCCTCTGTCTTCCAGTCGTTCATTAACGACGTCTTCCGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480207 True 289 lncRNA 0.54 1 440584 440872

Neighbor

gene id symbol gene type direction distance location
CI01000304_00424703_00434890 PRRC1 coding upstream 5518 424703 ~ 435066 (+)
CI01000304_00370333_00419672 MEGF10 coding upstream 19829 370333 ~ 420755 (+)
CI01000304_00315935_00342330 LMNB1 coding upstream 98061 314742 ~ 342531 (+)
CI01000304_00308220_00310793 NA coding upstream 129317 307673 ~ 311267 (+)
CI01000304_00292894_00306187 PHAX coding upstream 134105 292894 ~ 306479 (+)
CI01000304_00453663_00453991 CTXN3 coding downstream 12791 453663 ~ 455240 (+)
CI01000304_00480135_00531529 NA coding downstream 38909 479781 ~ 532037 (+)
CI01000304_00695426_00725459 SLC27A6 coding downstream 253589 694461 ~ 725459 (+)
CI01000304_00728178_00731945 ISOC1, ISOC1.L coding downstream 287084 727956 ~ 732274 (+)
CI01000304_00757894_00760456 NA coding downstream 317022 757894 ~ 760660 (+)
G418023 NA non-coding upstream 159558 279893 ~ 281026 (+)
G418024 NA non-coding upstream 162602 277261 ~ 277982 (+)
G417901 NA non-coding upstream 172374 168520 ~ 268210 (+)
G417984 NA non-coding upstream 216665 223015 ~ 223919 (+)
G418050 NA non-coding downstream 29343 470215 ~ 470572 (+)
G418056 NA non-coding downstream 37807 478679 ~ 478899 (+)
G418004 NA non-coding downstream 80812 521684 ~ 526522 (+)
G418003 NA non-coding downstream 109401 550273 ~ 551981 (+)
G418058 NA non-coding downstream 116719 557591 ~ 557792 (+)
G417987 NA other upstream 212731 226703 ~ 227853 (+)
G418059 NA other downstream 117220 558092 ~ 564451 (+)
G418116 NA other downstream 431798 872670 ~ 875249 (+)
G418981 NA other downstream 1651622 2092494 ~ 2093678 (+)
G420445 NA other downstream 3862464 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4732351 5173426 ~ 5176791 (+)

Expression


Co-expression Network