Gene
RNA
| Item | Value |
|---|---|
| gene id | G421782 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 4624700 ~ 4624922 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484414 | True | 223 | lncRNA | 0.32 | 1 | 4624700 | 4624922 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_04579087_04595306 | TJP2, TJP2A | coding | downstream | 28360 | 4578438 ~ 4596340 (-) |
| CI01000304_04536971_04554186 | MAMDC2B | coding | downstream | 70514 | 4536971 ~ 4554186 (-) |
| CI01000304_04522897_04527887 | SMC5 | coding | downstream | 96813 | 4522849 ~ 4527887 (-) |
| CI01000304_04517750_04518058 | NA | coding | downstream | 106642 | 4517594 ~ 4518058 (-) |
| CI01000304_04458463_04459040 | NA | coding | downstream | 165466 | 4457613 ~ 4459234 (-) |
| CI01000304_04661808_04672936 | PPWD1 | coding | upstream | 36844 | 4661766 ~ 4672947 (-) |
| CI01000304_04789939_04792844 | NA | coding | upstream | 164517 | 4789439 ~ 4792844 (-) |
| CI01000304_04809176_04857217 | CWC27 | coding | upstream | 184254 | 4809176 ~ 4857217 (-) |
| CI01000304_04894865_04896532 | CSN4, COPS4 | coding | upstream | 269943 | 4894865 ~ 4896705 (-) |
| CI01000304_04914520_04932141 | KIAA1958, E130308A19RIK, RGD1310951 | coding | upstream | 289598 | 4914520 ~ 4932141 (-) |
| G421780 | NA | non-coding | downstream | 1080 | 4621956 ~ 4623620 (-) |
| G421757 | NA | non-coding | downstream | 178026 | 4445389 ~ 4446674 (-) |
| G421742 | NA | non-coding | downstream | 259679 | 4364735 ~ 4365021 (-) |
| G421741 | NA | non-coding | downstream | 260099 | 4364278 ~ 4364601 (-) |
| G421740 | NA | non-coding | downstream | 260964 | 4363466 ~ 4363736 (-) |
| G421783 | NA | non-coding | upstream | 390 | 4625312 ~ 4625545 (-) |
| G421785 | NA | non-coding | upstream | 7267 | 4632189 ~ 4632647 (-) |
| G421787 | NA | non-coding | upstream | 8795 | 4633717 ~ 4633947 (-) |
| G421794 | NA | non-coding | upstream | 23630 | 4648552 ~ 4648965 (-) |
| G421795 | NA | non-coding | upstream | 24443 | 4649365 ~ 4649665 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 359499 | 4263846 ~ 4265201 (-) |
| G419354 | NA | other | downstream | 2358459 | 2262502 ~ 2266241 (-) |
| G419353 | NA | other | downstream | 2388594 | 2229384 ~ 2236106 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 1852529 | 6480743 ~ 6483986 (-) |
| G422354 | NA | other | upstream | 2006164 | 6631086 ~ 6631499 (-) |
| G422378 | NA | other | upstream | 2119757 | 6744679 ~ 6783046 (-) |
| G422810 | NA | other | upstream | 3005237 | 7630159 ~ 7652703 (-) |
