G425449


Basic Information

Item Value
gene id G425449
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11857629 ~ 11858050 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488533
CTGAAGCTTAAATCTGAAACACTATTAATACGTCTATCCCAGGGGTATACACTATTCAATAGTCTGGAGTCAGTAAGATTTTATTGAAAGATTAACAGATTTATTAAAAAATTACTGATTGTTTGATAGCAGTCTCTTCTGCTCACCAATGCTGCATTTAATTGATCAAAAATACATTAAAAAAACAGTAATATTGTGAAATATTACTATAATTTAACTGTTTTCTATTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488533 True 233 lncRNA 0.27 2 11857629 11858050

Neighbor

gene id symbol gene type direction distance location
CI01000304_11812792_11817948 NA coding upstream 39216 11812514 ~ 11818413 (+)
CI01000304_11685224_11691071 NA coding upstream 166558 11685224 ~ 11691071 (+)
CI01000304_11676155_11681977 MAP3K7CL coding upstream 174498 11676155 ~ 11683131 (+)
CI01000304_11613446_11620345 RAB38 coding upstream 237066 11613446 ~ 11620563 (+)
CI01000304_11582257_11610398 GRM5, GRM5A coding upstream 247018 11581808 ~ 11610611 (+)
CI01000304_11866424_11868022 UGT5D1 coding downstream 8050 11866100 ~ 11868083 (+)
CI01000304_11993486_12061098 FREM2, FREM2A coding downstream 135436 11993486 ~ 12062218 (+)
CI01000304_12065676_12071391 TRIM47 coding downstream 206769 12064381 ~ 12071430 (+)
CI01000304_12213555_12231910 NA coding downstream 354004 12212054 ~ 12232732 (+)
CI01000304_12314575_12337592 SYNJ1 coding downstream 456266 12314316 ~ 12337690 (+)
G425447 NA non-coding upstream 3857 11852113 ~ 11853772 (+)
G425404 NA non-coding upstream 10614 11845543 ~ 11847015 (+)
G425443 NA non-coding upstream 13094 11844231 ~ 11844535 (+)
G425442 NA non-coding upstream 13488 11843925 ~ 11844141 (+)
G425441 NA non-coding upstream 15390 11841784 ~ 11842239 (+)
G425462 NA non-coding downstream 32883 11890933 ~ 11891233 (+)
G425466 NA non-coding downstream 63612 11921662 ~ 11921962 (+)
G425602 NA non-coding downstream 118748 11976798 ~ 11984503 (+)
G425613 NA non-coding downstream 130807 11988857 ~ 11989311 (+)
CI01000304_10555326_10571933 NA other upstream 1301925 10555216 ~ 10572164 (+)
G424251 NA other upstream 1664734 10188822 ~ 10189404 (+)
G424246 NA other upstream 1730307 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2292056 9561005 ~ 9565778 (+)
G423614 NA other upstream 2908207 8949036 ~ 8949422 (+)
G425718 NA other downstream 570655 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1698401 13578049 ~ 13595097 (+)
G426312 NA other downstream 2471998 14330048 ~ 14330886 (+)
G426828 NA other downstream 3090840 14948890 ~ 14950592 (+)
G427860 NA other downstream 4027404 15885454 ~ 15889591 (+)

Expression


Co-expression Network