G425613


Basic Information

Item Value
gene id G425613
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11988857 ~ 11989311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488721
ATTGTTTTTAAAGTATTCCACAATCTTTTTATGCACTCTTTCACAACTCTGAGACTCTGCCTCTCTAAGACATCCCTTTTATAGCTAATCATGTTACAGACCTGATATCAATTAACTTAATTAGTTGCTAGATGTTCTCCCAGCTGAATCTTTTCAAAATTTCTTGCCTTTTCAGCCATTTGTTACCCCCGTGCCAACTTTTTTGAGACCTGTAGCAGGCATCAAATTTGAAATGAGCTCATTTAGTGGATAAAAGTGTACATTTCTCAGTTTAAACATTTGTTATGTTATCTATGTTATATTGTGAATAAAATATTGGCTCATGTGATTTGAAAGTCTTTTAGTTTTCATTTTATTCAAATTTAAAAAACGTCCCAACATTTCCGGAATTCGGGTTGTAGGTGAACTATGGGTTTTAGCCCTGTGGACTTTTAGAAATTAAAGTCTCTGAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488721 True 455 lncRNA 0.33 1 11988857 11989311

Neighbor

gene id symbol gene type direction distance location
CI01000304_11866424_11868022 UGT5D1 coding upstream 120774 11866100 ~ 11868083 (+)
CI01000304_11812792_11817948 NA coding upstream 170444 11812514 ~ 11818413 (+)
CI01000304_11685224_11691071 NA coding upstream 297786 11685224 ~ 11691071 (+)
CI01000304_11676155_11681977 MAP3K7CL coding upstream 305726 11676155 ~ 11683131 (+)
CI01000304_11613446_11620345 RAB38 coding upstream 368294 11613446 ~ 11620563 (+)
CI01000304_11993486_12061098 FREM2, FREM2A coding downstream 4175 11993486 ~ 12062218 (+)
CI01000304_12065676_12071391 TRIM47 coding downstream 75508 12064381 ~ 12071430 (+)
CI01000304_12213555_12231910 NA coding downstream 222743 12212054 ~ 12232732 (+)
CI01000304_12314575_12337592 SYNJ1 coding downstream 325005 12314316 ~ 12337690 (+)
CI01000304_12340979_12347664 SLC9A6B coding downstream 350536 12339847 ~ 12347890 (+)
G425602 NA non-coding upstream 4354 11976798 ~ 11984503 (+)
G425466 NA non-coding upstream 66895 11921662 ~ 11921962 (+)
G425462 NA non-coding upstream 97624 11890933 ~ 11891233 (+)
G425449 NA non-coding upstream 130807 11857629 ~ 11858050 (+)
G425447 NA non-coding upstream 135085 11852113 ~ 11853772 (+)
G425632 NA non-coding downstream 116029 12105340 ~ 12105578 (+)
G425635 NA non-coding downstream 122000 12111311 ~ 12116366 (+)
G425660 NA non-coding downstream 183571 12172882 ~ 12174059 (+)
G425666 NA non-coding downstream 265788 12255099 ~ 12257194 (+)
CI01000304_10555326_10571933 NA other upstream 1433153 10555216 ~ 10572164 (+)
G424251 NA other upstream 1795962 10188822 ~ 10189404 (+)
G424246 NA other upstream 1861535 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2423284 9561005 ~ 9565778 (+)
G423614 NA other upstream 3039435 8949036 ~ 8949422 (+)
G425718 NA other downstream 439394 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1567140 13578049 ~ 13595097 (+)
G426312 NA other downstream 2340737 14330048 ~ 14330886 (+)
G426828 NA other downstream 2959579 14948890 ~ 14950592 (+)
G427860 NA other downstream 3896143 15885454 ~ 15889591 (+)

Expression


Co-expression Network