G425462


Basic Information

Item Value
gene id G425462
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11890933 ~ 11891233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488546
CTGTCCCCAAAACAAGGTTACGATCCAGGGGTGACAGGGCCTTTTCATCGTATGCTCCAAAACTGTGGAACTCTCCCCCAACTGACATTAGGGATGCCAATTCTTTAGCTGTTTTTGAAACTTTGCTCAAAACATTCTTTTTTAGGAAAGCTTTTATTTGATTGTTTTGTGATTTATTTCTTGTTGATTTGTATAATATATTGTCTTATATTGTTGTGTTTTTCTTTTTTGTAGCTTTCTTGGAAAGCGCCTTGAGAAAGCAACTTTTAAAGGCGCTATACAAAATAAATGTATTATTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488546 True 301 lncRNA 0.34 1 11890933 11891233

Neighbor

gene id symbol gene type direction distance location
CI01000304_11866424_11868022 UGT5D1 coding upstream 22850 11866100 ~ 11868083 (+)
CI01000304_11812792_11817948 NA coding upstream 72520 11812514 ~ 11818413 (+)
CI01000304_11685224_11691071 NA coding upstream 199862 11685224 ~ 11691071 (+)
CI01000304_11676155_11681977 MAP3K7CL coding upstream 207802 11676155 ~ 11683131 (+)
CI01000304_11613446_11620345 RAB38 coding upstream 270370 11613446 ~ 11620563 (+)
CI01000304_11993486_12061098 FREM2, FREM2A coding downstream 102253 11993486 ~ 12062218 (+)
CI01000304_12065676_12071391 TRIM47 coding downstream 173586 12064381 ~ 12071430 (+)
CI01000304_12213555_12231910 NA coding downstream 320821 12212054 ~ 12232732 (+)
CI01000304_12314575_12337592 SYNJ1 coding downstream 423083 12314316 ~ 12337690 (+)
CI01000304_12340979_12347664 SLC9A6B coding downstream 448614 12339847 ~ 12347890 (+)
G425449 NA non-coding upstream 32883 11857629 ~ 11858050 (+)
G425447 NA non-coding upstream 37161 11852113 ~ 11853772 (+)
G425404 NA non-coding upstream 43918 11845543 ~ 11847015 (+)
G425443 NA non-coding upstream 46398 11844231 ~ 11844535 (+)
G425442 NA non-coding upstream 46792 11843925 ~ 11844141 (+)
G425466 NA non-coding downstream 30429 11921662 ~ 11921962 (+)
G425602 NA non-coding downstream 85565 11976798 ~ 11984503 (+)
G425613 NA non-coding downstream 97624 11988857 ~ 11989311 (+)
G425632 NA non-coding downstream 214107 12105340 ~ 12105578 (+)
CI01000304_10555326_10571933 NA other upstream 1335229 10555216 ~ 10572164 (+)
G424251 NA other upstream 1698038 10188822 ~ 10189404 (+)
G424246 NA other upstream 1763611 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2325360 9561005 ~ 9565778 (+)
G423614 NA other upstream 2941511 8949036 ~ 8949422 (+)
G425718 NA other downstream 537472 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1665218 13578049 ~ 13595097 (+)
G426312 NA other downstream 2438815 14330048 ~ 14330886 (+)
G426828 NA other downstream 3057657 14948890 ~ 14950592 (+)
G427860 NA other downstream 3994221 15885454 ~ 15889591 (+)

Expression


Co-expression Network