CI01000320_00833426_00905113


Basic Information

Item Value
gene id CI01000320_00833426_00905113
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 833369 ~ 905692 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000320_00833426_00905113.mRNA
GCATATAACCAAAGGGAGGGGGAAGGAGGATTACAGTATGCCCCGGCTGAAGGTGGCATGCCCCGCTCTCCGTCCGACTACGGACGTGACCCTGGCCGTTCGCCAAGGAGTTCAAGAATGTACAACGAGGTGGGCGATTATCGAGACAGTCGAGGACGCTGGCACTCACAAGGCCAGCGTTTGGACGGCCAGTTAGACGACTATGAACTCCAGAGGCGCCGTGAGGAGGAATACCAGGCCCGATACCGCAGTGACCCCAACCTGGCGCGCTACCCGGTCAAACCCCAGCCCTACGAGGAGCAGATGCGCATCCACGCCCAGGTGTCACGGGCTCGGCATGAGCGGCGCCATAGCGACGTCTCACTTGCTTATACAGAACTTGACGAGCCTCTGCATGGCCCCGGTGTGCGGAAGTCGCGCCTCCCTCTTTTGGGAGGCCCAAGTCAACTCTCATACTCTGTGGACAGGAGCTCACCGGGACATCGAATATCAAATCATAGCCCACCAACACCACACCGCAGCCCTGTGCTGGGTGAAAGCCGGCGAGGACTGGCGGAACCAACTAGGAAACCCATACCCCAACAGCACCACTTGGACCCTAGCTCAGCTATGCGCAGGAACAAACGGGACAAAATGGATAGCATGCTGCGAAATGATTCTCTAAGCTCAGACCAATCAGAATCGGTTCGGCCTCCTCCACCTCGACCCAACCGCAGCAAACGCCTTGGCAAACTCAGAACCATGGGCAGCTTTAGCAGCTCAGATGAGGAGTTGGCCACCACGCCAGAGTACACCAGCTGTGAGGATGTGGAGCTGGAGAGCGAGTCCATCAGTGAAAAAGGCAACATTCAAAGGGGAAAAAGAAAAACAAATGAGCAGGCATATTTTTTGGACGCCAGTTACGCCCTGTCTGAGAGGCAAAAGACAGTGGTGCGATTTTGGGAACGCTCTCACGATGAAGACGTGGAGTGGTGCGAGCCGCAGGTCAAAGATTCAGGGGTTGACACGTGCAGTAGCACCACGCTAAACGAGGAGCATAGCCATAGCGACAAGCACCCGGTGACATGGCAGCCATCCAAAGATGGAGAGCGCCTAATAGGGCGGATAGTGCTAAACAAGCGGATGAAAGATGGCACAGTGCCCAGAGACACGGGGGCACTGCTGGGCCTCAAGGTCGTGGGAGGGAAGATGACAGAGTCTGGCAGACTTTGTGCTTTCATCACGAAGGTGAAGAGAGGAAGTCTAGCAGACACTGTCGGCCATCTCCGACCAGGTGATCAGGTTCTGGAGTGGAATGGGAGAGTCTTGCAGGGAGCCACATTCAAGGAAGTTTACAATATTATTCTAGAATCCAAGCCAGAGCCCCAGGTGGAGCTGGTGGTCTCACGGCCCATTGGAGATGTCCCTAGAATACCAGAGAGCACACATGGGCAACTTGAATCAAGTTCGAGTTCCTTTGAATCCCAAAAAATGGGTCCCTCCATCTCTGTCACGTCCCCCATGAGTCCTGGCATGCACCGGGAAACCCCTCAGTATCTGTCTGGACAGCTCTCAGGCTGCCCTGGACCCTCTGGGGTGAGCTCTCCTTACAGACCATCTAAGAGAGTATGTTTCTTCCTGCAGGTAAAGCTGTGGTACGATAAAGTGGGACATCAACTCATCGTCACTATCCTAGGCGCCAAAGACCTGCCTTCACGAGAAGACGGGCGGCCTAGGAATCCCTACGTCAAAATCTACTTCCTCCCCGACAGAAGTGATAAAAGCAAGAGGAGAACGAAAACAGTGAAGAAATCTCTGGAGCCAAAGTGGAACCAGACGTTCATGTACTCGCCAGTGCACAGGCGAGAGTTCAGGGAGCGTATGCTGGAGATCACGCTATGGGACCAGGCCAGAGTCCGAGAGGAAGAAAGCGAGTTCCTGGGAGAGATTCTGATAGAGCTGGAGACAGCGCTGTTGGACGATCAGCCTCATTGGTATAAGCTCCAAACACATGACGTGTCCTCTATGCCGCTGCCTAACCCCTCACCCTACATGCAGAGACGTCTCCTACATGGAGAGAGTCCAACGCGCAGGTTACAAAATTACCGGCACAATGGCAGGGATTTCCAGAGCTCCACTCTGTCTGTACCTGAGCAGTCGAAGTTTAGACCATGGTGTGAGAGGAGCACCCTCGCTTTATGGCCCCCGACAACACCTGTCCGAAGACAGATACTCACCAGACAGCCAGTATCTTACCCTCCCTCCTCGAACCAGACACAGACAGCCAACCATCGACCCCGCTATCCAGGACCCCAGAGTGGAGGTGCCAAAAAAGGTGTCCCGCCCTCTTACCACCCAGATAACGCCCACTTGTCCCACCCGTCTCTAACTACTGCACTCTCACTTTCTGTTCTGACTCATAGTATGTGCCCCCTCTATCGGGAAGATGCGGTCAGGTTACTGCGCTCCACTAGGATGGCCCGTGCATACTCAGAAGGGTACAATAGCGTGGACAGGAGGATGAGGAGAGATAGACAAATGTCTGCCTACAGTGACTCTTTTGAATCACCTGAGAGATATTACAATGGGCCCAATCATGTATCTACTCCATGGCCCAATCATGTCATGAATGGAACCGGTGGGGATTACAGAGAGGATCATATTCCAGAGTTCCCAGCTAACAATGAGCACTTTGAGGAAGATCTGAGGTATAGCCGCAGCATGGTGGACAGACATGACCATTACAGGTCCAGGTCAGCTGACCAGCGGCCTATGATGGAGCGACCAGTCTACACCCGCTCCCGCTCATCCGAGCGGCCCGAGTCCGGCTACATGAGATCCATGCCGTCCTTACCATCAGGGAGATCCGCCCCTCCCTCTCCTGCCTTAACGAGAACAAAGGTTCTGGAACAGTTTAAATGGTGGCTTGTACAAATTTTATTACTAACCTTTGAGAAAACCGTGCCAAATATTGACTTATTTTGTTTAATAGAACACAGGCAAATCCCCGCACCGGATCGGTCCAAACAAGTCCAACCAGCACGCCAGTATCGAGTCGAAGAGGTCGGCAGCTACCGCAAGTCCCACCAAAGGGGTCTATGGACAGAACATGGGATGGACAGTCTCTCCATGAGGTCATCGGACAGTGATGTAAGCGACGTGTCCGCTATGTCGAGTGCATCTCGGCTTAGCAGCACGAGCTACATGTCTGTCCAATCAGAAAGGGTGCGAGCGAGTCGCAAGATCAGCCGTGCGGAGGCCCTTCAGAGTCAGGGAGAGGAGGGTGCTGTTGTTGTGGAAGAGCAGGTGGAAGCAACGACAGCAAGCGCACAGGGGGCGGGGCATGAAGGGGGGGTGGGTGGCACTACTGAGAACCCAGAGGAGGAGGAAGAAGAGGAGGAACCTGAGAGGGCTCAGACGGCCACCCCTGGCTCCAACATCACCAAGAGTTCCAGTGTGGGTGGAGACATGTGCTCGCTGGGCAGGAACGACGATGAGGACGATGACAAGAAGAGGCGCTCCAGCTTTGGGGCGAAGATGGCCGCCATGGTGGGACTGGGGAAAAAGAGTCAAAGTACCTCGCAGCTGGACCCAGAGGGCCACAGTGTTTGTTATTGTGGAGATGAACTGGGTCTGGCCGACTCAAGGTCTGTCACATGTCGATATTCAGACCACGGTGTTGCAGTTGCACTAGTGGCTTCATCATCATGGAGTGCACGTCAATATTTCACTAAGTGCTTCGTGAGTGATGACCACAACATGGTTCTAGAGGAAAAACCAGCCTGAAACTCCATCAAGGGCTGTCTTTATGGAACAATACATTGGTCATACTTGAGATCTATGCCCATGTCCTATGTGATTTAAGGATACACATAAATGTGTGCTTAATTCATCCTAGGGCTGTGCGATTAATCAAATTTTAGTTTAAATTTAGATTTTGGCTTCCAGCGATTATGAAATCATGAAAATCAAGATAAAATGATTATTATGCCGCATCCCATTACAGTGGTGTGCTTTCGCTTCTCCTTAAAAGCCTAAACTTAATGTCAAAATCAGTAAAATCATGTAACGTGACTTTTAAAACCGAGTTCACACTGTACGATTTATAATAGTCCTTTACTATTGTTGCTTGTCAGTCTGTATGAACATGATCCCCGCTATTAGCCATGTCACGCTGTGGGATCTCAGTTGTCTTTAATTTGTTAAAATTCAAGATTTGTAAAAAAAACAGTCGCACACGAAGACTCATCCAGAGTTTTACATCATCAATCCGTGATGGTGATGGTGAGCTGCGTTTACATGTGGGATTGAAATGTCTCCAGTTTTCATTTTGATCATGGCTTGTCTTGAAAAGACAAAAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000320_00833426_00905113.mRNA True 4344 mRNA 0.52 25 833369 905692

Neighbor

gene id symbol gene type direction distance location
CI01000320_00783563_00803806 NA coding upstream 29014 783563 ~ 804355 (+)
CI01000320_00735525_00742322 CTHRC1, CTHRC1A coding upstream 90485 734864 ~ 742884 (+)
CI01000320_00672652_00673710 MC5R, MC5RA coding upstream 158595 672652 ~ 674774 (+)
CI01000320_00645879_00646515 NA coding upstream 184500 645879 ~ 648869 (+)
CI01000320_00596242_00605090 RNMT coding upstream 228133 596116 ~ 605236 (+)
CI01000320_00915850_00922116 NA coding downstream 7401 913093 ~ 922286 (+)
CI01000320_00998626_01009523 NA coding downstream 92934 998626 ~ 1010590 (+)
CI01000320_01018345_01040605 ZFPM2B coding downstream 111471 1017163 ~ 1041214 (+)
CI01000320_01050034_01055863 SRSF4 coding downstream 144063 1049755 ~ 1056107 (+)
CI01000320_01062113_01063824 NA coding downstream 156241 1061933 ~ 1064327 (+)
G454083 NA non-coding upstream 74733 741677 ~ 758636 (+)
G454076 NA non-coding upstream 207163 625957 ~ 626206 (+)
G454074 NA non-coding upstream 208872 624289 ~ 624497 (+)
G454070 NA non-coding upstream 218635 614510 ~ 614734 (+)
G453873 NA non-coding upstream 292527 535081 ~ 540842 (+)
G454149 NA non-coding downstream 26859 932551 ~ 933335 (+)
G454157 NA non-coding downstream 63220 968912 ~ 969132 (+)
G454174 NA non-coding downstream 72893 978585 ~ 978815 (+)
G454179 NA non-coding downstream 82600 988292 ~ 988549 (+)
G454183 NA non-coding downstream 85882 991574 ~ 991795 (+)
G454251 NA other downstream 308886 1214578 ~ 1215032 (+)
G455129 NA other downstream 1284625 2190317 ~ 2197008 (+)
G455393 NA other downstream 2194132 3099824 ~ 3100289 (+)
CI01000320_03117532_03169741 NA other downstream 2211855 3115820 ~ 3169749 (+)
G455404 NA other downstream 2215124 3120816 ~ 3121105 (+)

Expression


Co-expression Network