G454174


Basic Information

Item Value
gene id G454174
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 978585 ~ 978815 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU521451
TTTTTAAATACACTTTTGGGAGGTACATTTATTGTTTCACAAGTTCATATCTGCTCATGTAATCCTTGAATATAATGAAGGTAAACAAATTTGGCTTGAACTTGAGACTCTGAGCTCTGAAGTTTGTTATAAAATTTATATAAATAAAGGTGGAGCTGCAAGAACTGGTACTTCATGCTACTGAAACATGCAGCTCTTGCATTATATTTGACAATATTAGATGAATTTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU521451 True 231 lncRNA 0.32 1 978585 978815

Neighbor

gene id symbol gene type direction distance location
CI01000320_00915850_00922116 NA coding upstream 56299 913093 ~ 922286 (+)
CI01000320_00833426_00905113 NA coding upstream 72893 833369 ~ 905692 (+)
CI01000320_00783563_00803806 NA coding upstream 174230 783563 ~ 804355 (+)
CI01000320_00735525_00742322 CTHRC1, CTHRC1A coding upstream 235701 734864 ~ 742884 (+)
CI01000320_00672652_00673710 MC5R, MC5RA coding upstream 303811 672652 ~ 674774 (+)
CI01000320_00998626_01009523 NA coding downstream 19811 998626 ~ 1010590 (+)
CI01000320_01018345_01040605 ZFPM2B coding downstream 38348 1017163 ~ 1041214 (+)
CI01000320_01050034_01055863 SRSF4 coding downstream 70940 1049755 ~ 1056107 (+)
CI01000320_01062113_01063824 NA coding downstream 83118 1061933 ~ 1064327 (+)
CI01000320_01366265_01378718 TMEM222 coding downstream 387450 1366265 ~ 1378933 (+)
G454157 NA non-coding upstream 9453 968912 ~ 969132 (+)
G454149 NA non-coding upstream 45250 932551 ~ 933335 (+)
G454093 NA non-coding upstream 124767 806890 ~ 853818 (+)
G454091 NA non-coding upstream 134400 838744 ~ 844185 (+)
G454083 NA non-coding upstream 219949 741677 ~ 758636 (+)
G454179 NA non-coding downstream 9477 988292 ~ 988549 (+)
G454183 NA non-coding downstream 12759 991574 ~ 991795 (+)
G454187 NA non-coding downstream 20893 999708 ~ 1000026 (+)
G454188 NA non-coding downstream 21663 1000478 ~ 1000805 (+)
G454161 NA non-coding downstream 104823 1083638 ~ 1084062 (+)
G454251 NA other downstream 235763 1214578 ~ 1215032 (+)
G455129 NA other downstream 1211502 2190317 ~ 2197008 (+)
G455393 NA other downstream 2121009 3099824 ~ 3100289 (+)
CI01000320_03117532_03169741 NA other downstream 2138732 3115820 ~ 3169749 (+)
G455404 NA other downstream 2142001 3120816 ~ 3121105 (+)

Expression


Co-expression Network