XLOC_001311 (ppp1r9alb)


Basic Information

Item Value
gene id XLOC_001311
gene name ppp1r9alb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 31071708 ~ 31105376 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002144
ACGTTCAGGGAAAGACTTCGGAGAGGAATGACGACGAATAATCTAAaaagtttgtgatttttttaggAGTTTGGCATGGTTTCTCAGTTCGTCCGTAAGTCGCAATGAATGAAGTTCAGGTAAGATCGGTTGGCACTGTGTCACTCACTCACCATTGTCTGTGTCTACAGCCTCAGCCAGTGTGAATGAGGGCATACCATGCACCTGGATACACGCTGCTTTTTTAGCCCcagttttatgtattttaccttttaaatcttccatcatttttaaatatttgatcatgattaaaagtgaaaacaaaagtgaCCGTGCACTGAGAAGTGCATCTCCTCACAGAAACGCATATAAATCAGACTTTCATTCCATTAAATGCACATTTGATGGAAGTGCATCCTTCAGCGCAACTTCTCCCTTCTCCAATGGAGACGGTGAGACTCGAGGCAGACCGTCGGGTAACAAagtgagcaaaataaaaaatattttcttgcaAATGGATGGAAAACAAAATCAAGACAGTCCCAACATCAGCAAACCCACATCACCCAGATTTCCATTGGATTCCACCCCTTACAGGTCTAGCCAGAGCAGTGTTTCTAGTCTAGATTCAGCCACTTTTGAGACACGGAAAACAGAGGATGTTTCCATTAACAAGGCGGCTCTGGCTGAGAAGTTCTCAATGACCAGAAAGCTGTTTGAGAGTGGCCTTAAAGAACAATCTCCAACTGAAAGATCTGCCTCCATTAAAGTCATCTGGCCTCAACCAATGGAGAGACCGGATATGAAAGTGTCAGTGACTGGAGAGAAAAAGGACAAAATGAATGTGATAGAGGGACAAGCAGAAGAAAGGGATGATAAGGAAAAAGAGAAAGGCGAAAGTGAGACACCACCACATAAGCTGAGCACCTCTATGAATGCCGGGCCAATTTCCAGACGTCTGGAGAGTTTTATGTTAGACAGTGATAGCGAATCGCTGTCAGCGGCTCCTTCCACAGAATCCCACAGTCCCATCAGTCATTCCCAGTCACCTTCCGCTACTAGTGACCATTCAGATCCACCTTCATCACCAGACAGCTGTAGTTCCCCTACATCCTACTTACTATGGGCTGATTCACCTTCTGAAACATGTTTCCCCAAGTTACATGGTTCAGATTTACACAATCCCCCTTTGAATGGAGTCTGTATGCAGAAAACCTTACATAATACTAGTTCCACACCTGAAGAACATGTTAATGAATCCCCAGAGGATACAGTATCATCAGAACCCACTCTTTTGTTTACAAGTGAAAAGGTCCACATCTTCTCATCAATGACAAGCACTAGTCATGCATCTGAAGCTGAGGATCCTGCTTTTCAGGAGCAGCAAGGTGAAGGGACAAGTTCTGAGAAGGTTCCTGGTTTGTCCACAGTCAGAGCTGAGCTGGTGGTAGTGAAGACCGAATCATCTGAGAGTGAGGGCAACGAGGAGGAACTTGCTGAGGATGATGTTTTTGAGGAGCCTGAAATGGAGGAACAATCACTAAATTACAATTCTGGGAGAATTTTGACCAACAGCGAGGAACACCGATTAACATTCCTTGGGAAGTTGTGCGAGGAATCTGTACACACTGGAAAAAAGGAGGACCATAGAGGGGAGGGAAATTTTCTTGAGGAGAACATAATGGAACAAGAAGATGACGATGAGGAGGAGGGAAAAAAAGACAACAAGGAAGTAGACCGAAAGACAGACCGAACTGAGGAGGAGGTTGTTCTAGAGAGTGTAATGGGAGAGGGTGAGCAGAAAGCTACTGATGTTGAAAATAAggaacagcagaatgaacagagAGAAGAAGAGGATAAGGAAGAGGATGGCAGGGTAGAAGAAGCTGTTGAAGCTTTGGAGGAGGACGAGGATGAACGAGAGATGGAAGATGAGGACTTAGCAGGAAAAGAGAGGCAGCAGCAAGATGATCAGGGTTTGATGGGAAACCGATCTTTAATTTGTGGAATTGAGAATGCTGCCTTTGTGGATGACAAGGACAACCGGACCGATTTGGAATGTCAAGTGAAGGAGGAATCTGAGGAATTTGAAGAACTTCCAGGACTTTCTGATGAGGAAAACCTCAACCCAAAGAGAAAAATCAAGTTTTCTACAGCACCAATCAAGGTGTACTTCACCTTCTCTAATGAAGACTATGACCGTAGTAATGACGATGTGGACCCCGTATCTGCATCTGCTGAATATGAGCTGGAAAAGAGGGTGGAAAAAATGGATGTTGTGCCCATAGACATTCAAAAAGgaaaTGATGGCCTGGGAATCAGTATCATAGGGATGGGGGTTGGAGCAGATCAAGGACTGGAGAAGCTGGGCATTTTTGTGAAAACCATCACCGAGGGAGGTGCAGCTCACCGGGATGGACGagtacGAGTAAATGATCAGATTGTGGAGGTAGATGGAATCAGTCTGGTTGGTGTCACTCAACACTTTGCTGCCACCACATTGAAAAACACTAAAGGTCTTGTCAAATTCCTAATAGGCCGAGAGAAACCAGGAGTGGAGAGTGAGGTGGCTCGTCTGATCAGCGAGACTCTACAACATGAGACAAGCCCTGAAAACCAGGAGCCAAAAGATGAGGACCATCCCAAACCCCAGAACAATCACCTACAGGAAGAAAAGCAGATTTATTACCAACATCAGGATCAACAGGAAATTGATCCACTGGCTGAAAAGAATGTTGTGCAACAGGATAAACAGAAAGAGGCCGAAGAGGAGCAGAGTGCGGAGGATGCATCCAGCGAATTGGCACAGGAAGTGTTTTCACAACTGAAGAGCCAAGGCATTGATCTACCTGAAGATATAGATGCTACTGAACTAGAACACAAATTCAAAGAGCTGCAGATAAAACACAGTGTCACAGTCACAGAACTCAGTCAGTTAAGAGAAAAGTTGGAAGTGAGCGAAGCTGAACGTAAGTCTTGGGAGGCTCGAGGTGCAGCTCTTGAAAGAAGTGTGGAAGAGAGCAAAGAGCGCATTGAAAAGCTGGAAAAATACTGGCTTGATGCTCAGGGGCTCTGCAAAACCATCAATCAGCGTTTAAATGAAGCCCAGAGTCAAAATGACTCCCTTCAGCTGAAATACAATAAGACCATCACGCTTCTACAGGAGCATCAACAGAGAGAGGCTGAATGTGGCAGGAAAGAGGCAGAGCTAAAAAGAAAACTGGAGCAAAAGGAAAAAGAGTACAAGACCAGTGTGAGGCAATTACAGTATAAGATTGCTTGTCTGGAAGGCCAAGCTGGATCAGACCAGCCCGAAGAGTCTTGCAGCCCTGCAGGAGAGAGTCAACCCAGCAGTCCAACCTCTGGTTCGTCTGAAAGAAATGGACTTTCTACAGACGACCTTCAATCTGATGCAGACTGGGGAGATGTTCCTCAGACGGCTCGTCTGGACTGCAGTGTCTATAGAGCCAAAGCCAAACTGGTGCAGGGATCCCAACGCAAGCGGCCGTCCCGAAATAAACTCAGAGAGTCAGCGAAAAGCTCGCAGGGACAGAGCCAATCACAGGAATCTGTGTGCACGCAAGGCAAACCAGAAAGAACAAACAGTGAAAGAAGGCGATCTTACCTCGAGAGCCTAGCTATACCCATTCCAACCATACAGTTTGGCAACAACCAAACACATGATCTGAGAAGTGAAGGTGGAGGTGACGTATTTGTTCAGAGCCAAACACCTCAAGGAGGAAGTAGCACGCAAGCCAGCCTTTCTCCACCTAAAGACTCCTCCACTCCTCAGTCCCCATCATCTTCACAGTCCTCCTCCAGTCTGTTCCTCAACCTAAGAAACAGAAGAAGTAAAGCCAAGGAGCGCAGCAAGAGCAGAGCCAGCCGAGatgAAGAGAGTGATGGTTCACTTACAAGAAAGTCCAAGAGACGATTTCCAGATTTCAGTGGTATCCGCCGGTCTGGAGGCAAAGGCAAAAAACGGGAGAGCATCACACTCCGAGGATCTGTAGGGAGCAGGGGATCAGGAGAATTACTGGATGAGTCGAGCTGCAATGTTTCCCCCTCTGGCTCCGTCTCTTCCATCCCTTCCTGTATGCCGTTCTCCTGGTTTGGGGACAGAGACAAGGaaaaagatagagagagagaaaaagagcgtTCCGCATCCAGTGGCAGTCTGCCTCGCTCGCCTTCAGAAGGATACATAGAGGATCATACAAACAAGACTCTTGATGATGTCTCCACTCCAGCAGCAAAGCAATACATGTGGCAGAACCGCCCTCTTTCAGAGTGGACCAATCAGCAAGTTTGCCACTGGTTGATGGGCATGAACATGGAACAGTATATAGCCGAGTTTACAGCTAAAGGCGTGGATGGCCAGCATCTCTTGAGCATGGACAGCAGTAAACTTAAGGAACTTGGTGTTTCTAGCCAAAGAGATCGTGCTACCATCAAGAGGAGACTAAAGGACATGAAGAAAGCTCAGGAAAAACTTGAAAAACAGcaggtaaaaaaagaaaaagaaagaggaagagaAAAGGACGCCAATAATAAAAGCAGACAACCAACAAACTTTGAATCAGCCTGCTGAGGACATAACAAACATTGACAAAACCATCTTTCACAGGTGATTTGAGGACTGGTGAAAAATTATTCACTCTTTAAGTCTGActgaatacatatttttattgtaaatgtgtCTTGCCTCTAACATGTTTTTGACACAAACCAACATTTAAAGAATCAATTCCTGTCTGCCACATTGACATTAACATGCATAATGGCACTTAGAGAATGGGAACTTATAACCTACTTATCCAAAAGGATATTTTTTTATTGCCTTGAGCTGATTTGTTTAAGTGATATGACTGACTGATGCAGTTTGTGGTACTAAAAGTGATTTAATGctgtccaccagagggcgctgatGTAAATATGTGGCACGGTAATGTTGTTGAGATGGTCAAACTAGTTCTTCAGCATTAAGACAAATGCCAAATTACAATGCCAAGCTGCTAGTGCACAATCTGCACTTTAGCCAAACGTCAACAAATAATCCCAGTGTGAATCTCTCAATGTGATGCGCACAGGGTTAATACTCCTCATTAGGTAACTTGTGCTCCCTCTTCTAGTGTACActtttgaagggatagttcacacacaaaaattaaaacttcattttcaagtagttctaaacttttatgaatttctgtctactgttgaacacatattaaatattttccagaatgctaaaaaagcagccattgacctccataataggaagtaaaaatactatggaagtcaatggcagtttcCCGCATTATATCTTTTATTGTGTtcaaaaaaagaaactcagacaggtttAGAACAAATCAGTTAATGAGGATTTTGATTTTTAgttgtactgtccctttaagtgagCACTTCACCATACAAGTCAGGTGTCTTTTTTTTAAGAgtcatctttttttaatgtttattgtacATAACTCTTAGTGATGTAAATTTTACTGTAGAGAGGAGAGCAATTCATTGTCTTCTATGTCACAGCTGATGATTTTACatgtgtattaataaataaatattttacaactaC
>TCONS_00002145
GCAAAAAACGGGAGAGCATCACACTCCGAGGATCTGTAGGGAGCAGGGGATCAGGAGAATTACTGGATGAGTCGAGCTGCAATGTTTCCCCCTCTGGCTCCGTCTCTTCCATCCCTTCCTGTATGCCGTTCTCCTGGTTTGGGGACAGAGACAAGGaaaaagatagagagagagaaaaagagcgtTCCGCATCCAGTGGCAGTCTGCCTCGCTCGCCTTCAGAAGGATACATAGAGGATCATACAAACAAGAGCTTATCTGTGACGGGTGATTCAGTCGCAGGTAGTCCTCGTTCTCTGTTGGCAGGGTTTCTGAGAGAGCCCCATGTCCTTgggcgctcacacacacacaccttctccTCGTGTGAGACTCTTGATGATGTCTCCACTCCAGCAGCAAAGCAATACATGTGGCAGAACCGCCCTCTTTCAGAGTGGACCAATCAGCAAGTTTGCCACTGGTTGATGGGCATGAACATGGAACAGTATATAGCCGAGTTTACAGCTAAAGGCGTGGATGGCCAGCATCTCTTGAGCATGGACAGCAGTAAACTTAAGGAACTTGGTGTTTCTAGCCAAAGAGATCGTGCTACCATCAAGAGGAGACTAAAGGACATGAAGAAAGCTCAG

Function

symbol description
ppp1r9alb Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization; calcium-mediated signaling; and neuron projection development. Predicted to act upstream of or within nervous system development. Predicted to be active in several cellular components, including actin cytoskeleton; dendrite; and postsynaptic density.

GO:

id name namespace
GO:0007015 actin filament organization biological_process
GO:0019722 calcium-mediated signaling biological_process
GO:0031175 neuron projection development biological_process
GO:0030425 dendrite cellular_component
GO:0015629 actin cytoskeleton cellular_component
GO:0014069 postsynaptic density cellular_component
GO:0005737 cytoplasm cellular_component
GO:0051015 actin filament binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090312-99 Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization; calcium-mediated signaling; and neuron projection development. Predicted to act upstream of or within nervous system development. Predicted to be active in several cellular components, including actin cytoskeleton; dendrite; and postsynaptic density.

Ensembl:

ensembl_id ENSDARG00000074575

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002144 False 5575 mRNA 0.44 18 31071708 31105376
TCONS_00002145 True 629 mRNA 0.50 5 31072818 31083535

Neighbor

gene id symbol gene type direction distance location
XLOC_001310 dlx2b coding downstream 92001 30977936 ~ 30979707 (-)
XLOC_001309 BX548015.1 coding downstream 148567 30919336 ~ 30923141 (-)
XLOC_001308 NA coding downstream 192862 30838563 ~ 30878846 (-)
XLOC_001307 NA coding downstream 228961 30828356 ~ 30842747 (-)
XLOC_001306 dis3 coding downstream 309444 30736449 ~ 30762264 (-)
XLOC_001312 kcnq5b coding upstream 29566 31134942 ~ 31350148 (-)
XLOC_001313 BX284697.2 coding upstream 183160 31288536 ~ 31296246 (-)
XLOC_001314 rims1b coding upstream 269375 31374751 ~ 31505144 (-)
XLOC_001315 cenpk coding upstream 403363 31508739 ~ 31516112 (-)
XLOC_001316 lbx1b coding upstream 426614 31531990 ~ 31534089 (-)
XLOC_001301 CR382370.2 non-coding downstream 630648 30439422 ~ 30441060 (-)
XLOC_001299 CR382370.1 non-coding downstream 736879 30333202 ~ 30334829 (-)
XLOC_001317 NA non-coding upstream 492942 31598318 ~ 31600848 (-)
XLOC_001321 CR925879.1 non-coding upstream 1210959 32316335 ~ 32318911 (-)
XLOC_001322 NA non-coding upstream 1486440 32591816 ~ 32648729 (-)
XLOC_001323 CU929192.1 non-coding upstream 1896183 33001559 ~ 33001673 (-)

Expression


Co-expression Network