G473711


Basic Information

Item Value
gene id G473711
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 1239069 ~ 1239334 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU543617
TGTACACTGTAAAAAATGAATGTGATTTTAACAGTAAAATATTGTAAAAACGCTACGGAAAAAAATTGTAAATAGGTTAACAGTAAGTTCCAGTACTATATACAGGGAAAAACTGTAAAAGCTCTTACCAGACATTTTATGTAATTTTCACAGTAAAATGCTGTAAATTTTACAATTTTTAGAAGTAAAAAAGAACAAATCAATGTATAATTTACAGTCAAAAACTGTAAACTGATATTCCCACAATTCCCTGTGTGACACTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU543617 True 266 lncRNA 0.28 1 1239069 1239334

Neighbor

gene id symbol gene type direction distance location
CI01000330_01225611_01226156 ASCL2, ASCL1, ASCL1B coding upstream 12149 1225245 ~ 1226920 (+)
CI01000330_01180674_01200580 PHRF1 coding upstream 38148 1180674 ~ 1200921 (+)
CI01000330_01162093_01168098 RASSF7A coding upstream 70744 1162093 ~ 1168325 (+)
CI01000330_01112605_01119220 NA coding upstream 118963 1112605 ~ 1120106 (+)
CI01000330_01043094_01051071 LDH-A, LDHA coding upstream 187998 1043094 ~ 1051071 (+)
CI01000330_01348143_01348817 NA coding downstream 108484 1347818 ~ 1348817 (+)
CI01000330_01364642_01375705 HEXA coding downstream 124044 1363378 ~ 1376127 (+)
CI01000330_01388435_01391261 NR2E3 coding downstream 147358 1386692 ~ 1391601 (+)
CI01000330_01392662_01401121 NA coding downstream 153328 1392662 ~ 1401430 (+)
CI01000330_01406033_01412800 CYP11A2, CYP11A coding downstream 166624 1405958 ~ 1412800 (+)
G473648 NA non-coding upstream 21105 1213690 ~ 1217964 (+)
G473662 NA non-coding upstream 171868 1061760 ~ 1067201 (+)
G473546 NA non-coding upstream 479101 759644 ~ 759968 (+)
G473545 NA non-coding upstream 479844 758867 ~ 759225 (+)
G473440 NA non-coding upstream 589610 637996 ~ 649459 (+)
G473713 NA non-coding downstream 2043 1241377 ~ 1241703 (+)
G473738 NA non-coding downstream 39015 1278349 ~ 1278639 (+)
G473739 NA non-coding downstream 50392 1289726 ~ 1290008 (+)
G473742 NA non-coding downstream 55558 1294892 ~ 1295117 (+)
G473750 NA non-coding downstream 74365 1313699 ~ 1314095 (+)
CI01000330_02046876_02054740 NA other downstream 807447 2046781 ~ 2054740 (+)
G474750 NA other downstream 1154823 2394157 ~ 2399678 (+)
G474771 NA other downstream 1260768 2500102 ~ 2510170 (+)
G474777 NA other downstream 1272122 2511456 ~ 2514764 (+)
G474807 NA other downstream 1355712 2595046 ~ 2598105 (+)

Expression


Co-expression Network