XLOC_001351



Basic Information


Item Value
gene id XLOC_001351
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 35953978 ~ 35955838 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00003441
GAAAATCGCCTCATCAAAAGAATCCCCTCCAGCTTGATGAGAGCTGTCCTGTTAGTGAGGAGGGTGCTAGAAGAGACCAGGAGGTAAGGAGACCGGGAGAAGTGGCGAAAGAAAAGGAGATTTTGGAAGAAGCTGGTCTGTTTCTCCTTTCTTCGCCCAAAACCTGGTAAAGAAAGCTCAGGGGAGCAGCAGAGTGAGAGAAAGAAAAGGTGAAGCAGGAGGCGGAGGCAGAGGCAGAACCTTCTACTTGTTGTAACGTTATtgATTTATGTCAATTTCCCTCTTTGGATCAAACCACTGTACAAGATAACACATGCACTGTCGAGGATTGTGTCCACCAGAAAGGCACTTCATCAGTAGACCAGCAGATTCAGGAGCAGAGTGAGGAGGTGACGCAGGACGTACGCTGAGGCAGAACCTTCCACTAACGAATCATCCTGATCCCGAAGAGAGGACTCCTCTTGACCAGATTCTTCTCCAGGACTAGTTCAGGATACCTGAGATAAGCAAAAACACTGAGAGTAACACAGCTGCAtgatgctttaattttttttaagattgAATGTTTTTGCATTA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00003441 True 576 lncRNA 0.46 3 35953978 35955838

Neighbor


gene id symbol gene type direction distance location
XLOC_001350 NA coding downstream 784 35952195 ~ 35953194 (-)
XLOC_001349 smad1 coding downstream 24835 35896488 ~ 35929143 (-)
XLOC_001348 si:dkey-27h10.2 coding downstream 258254 35662474 ~ 35695724 (-)
XLOC_001347 frem3 coding downstream 300418 35614089 ~ 35653560 (-)
XLOC_001346 NA coding downstream 618562 35332304 ~ 35335416 (-)
XLOC_001352 NA coding upstream 16782 35972620 ~ 35973783 (-)
XLOC_001353 znf827 coding upstream 62029 36017867 ~ 36152131 (-)
XLOC_001354 BX324156.2 coding upstream 232346 36188184 ~ 36218748 (-)
XLOC_001355 NA coding upstream 392855 36348693 ~ 36351488 (-)
XLOC_001356 NA coding upstream 399943 36355781 ~ 36356466 (-)
XLOC_001345 CR786582.1 non-coding downstream 635769 35317354 ~ 35318209 (-)
XLOC_001344 NA non-coding downstream 675952 35233074 ~ 35278026 (-)
XLOC_001342 NA non-coding downstream 956190 34984555 ~ 34997788 (-)
XLOC_001357 NA non-coding upstream 468930 36424768 ~ 36472822 (-)
XLOC_001360 FP102961.1 non-coding upstream 1408034 37363872 ~ 37363990 (-)

Expression



Co-expression Network