XLOC_014227 (BX510986.1)


Basic Information

Item Value
gene id XLOC_014227
gene name BX510986.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 40171960 ~ 40212192 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028283
CTCCTGAAGATCTTGAAGCTTTTTCTGAAAGTTATGgtgaaagctgaccagccatTTGTAGACAGACTCCTCCCAGTGCAATTACTGGAAACTTCATCAGttgtcataGtctGTGATGctcaa
>TCONS_00030022
CGCAACGTTACCTCTGTCCGTCATCATGTCGTCGGTCATCCCGAAAGTGTGtggtCTGCCATACCTGATCTTTCTGGAAGGTTCTGGTGGCCTTCTGGAAGGACGATGGCAGAGTCAGCCAGCCCCGCAGGCATCGGGTGGAGGTGGAATCGCAGCGATATCCATGTTGACAACAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGAAGAGAGTGAACAAAGGTTAACCCTGTAACTATGAGTAGAAACATATTAACTCGAGATTCTGTTACCATTGAGTAAGGACAACATGACCATATGCCATATGGACTCAGACAGCATGTTGTTCCGTCTGGACACACAGTTTGAGCATCGCAGTAAATCACAGAGGCAGAGGTGTCTACAGTCTCCACCGGGATAGACAGATCAAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAGTATTAgTGGTCTGCCATACCTGATCTTTCTCGAAGGTTCTGGTGGCCTCCTGGAAGGACGATGGCAGTGACAGCCAGCCTCGCAGGCATCGGGTGGAGGCGAAATTGCAACGATAACCGTGTCGACAGCAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGGAGAGAGTGAGCAAAGGTTAACCCTGTAACTATGAGTAGAAGAATATAAAAAACAAGATTCTCTTACCATTGGGAATGGACAACATGTCCATTTGCCATATGGAGTCCGACAGCATGTTGTTCTATCTGGACACACAGTTCGAGCATCGCAGTGAATCACAGAGGCAGAGACGTCTTCAGTCTCCATCGGAATGGACAGATCCAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAATATTAgtgtttgcaCACATTGACACTTGTCTGGATGGCTGGTTTTCTGAACTGACACTGTGCAGGATGGAAAGATGCTGCCTGAGCCAAAAGAGGCTGGATGGAGGCCACGGTGACTCTGAGGAACCAGTGTCCCGTCTGAACCCACACACATGAACATGAG
>TCONS_00030023
TTATTAACGAACTAAAAGCTGATATCTCAAACGCAAGTAGATACTCACAATGTTTGACTTGTCTGCATAAAGTCTCGGCGAGGTTTTGAATTAATTTTCTGTTCATCGCCGAcattttcagcatgttttactcTCTTTTTAGTCTTTGGTTGAATGTTGCTGTGGAAACGTGTAATGTGGGCGGGGCAATGTTGTGACGAGCAAGCGCTGCATACACAAACCAGGATACATCGATTTAACGCATTTTAACTTGTCGAGCGTTTCCCTTCAGGGACGCATTTTGCAAATTTATGAAGGTAATTCTTCGTTTAAAGTCGTATACCAGCGGATACAGTATGTGtggtCTGCCATACCTGATCTTTCTGGAAGGTTCTGGTGGCCTTCTGGAAGGACGATGGCAGAGTCAGCCAGCCCCGCAGGCATCGGGTGGAGGTGGAATCGCAGCGATATCCATGTTGACAACAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGAAGAGAGTGAACAAAGTTTGAGCATCGCAGTAAATCACAGAGGCAGAGGTGTCTACAGTCTCCACCGGGATAGACAGATCAAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAGTATTAgACTCCTCCCAGTGCAATTACTGGAAACTTCATCAGATTTGTTGTTGAGATTTATACTAACAGGAAATCTTATCAGTTATCTTGTGACCCATGGCATTTAGAAACAGGATCATGAACTTGGAGAAGTGTTTGAATGAAA
>TCONS_00030024
TTATTAACGAACTAAAAGCTGATATCTCAAACGCAAGTAGATACTCACAATGTTTGACTTGTCTGCATAAAGTCTCGGCGAGGTTTTGAATTAATTTTCTGTTCATCGCCGAcattttcagcatgttttactcTCTTTTTAGTCTTTGGTTGAATGTTGCTGTGGAAACGTGTAATGTGGGCGGGGCAATGTTGTGACGAGCAAGCGCTGCATACACAAACCAGGATACATCGATTTAACGCATTTTAACTTGTCGAGCGTTTCCCTTCAGGGACGCATTTTGCAAATTTATGAAGGTAATTCTTCGTTTAAAGTCGTATACCAGCGGATACAGTATGTGtggtCTGCCATACCTGATCTTTCTGGAAGGTTCTGGTGGCCTTCTGGAAGGACGATGGCAGAGTCAGCCAGCCCCGCAGGCATCGGGTGGAGGTGGAATCGCAGCGATATCCATGTTGACAACAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGAAGAGAGTGAACAAAGTTTGAGCATCGCAGTAAATCACAGAGGCAGAGGTGTCTACAGTCTCCACCGGGATAGACAGATCAAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAGTATTAgTGGTCTGCCATACCTGATCTTTCTCGAAGGTTCTGGTGGCCTCCTGGAAGGACGATGGCAGTGACAGCCAGCCTCGCAGGCATCGGGTGGAGGCGAAATTGCAACGATAACCGTGTCGACAGCAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGGAGAGAGTGAGCAAAGGTTAACCCTGTAACTATGAGTAGAAGAATATAAAAAACAAGATTCTCTTACCATTGGGAATGGACAACATGTCCATTTGCCATATGGAGTCCGACAGCATGTTGTTCTATCTGGACACACAGTTCGAGCATCGCAGTGAATCACAGAGGCAGAGACGTCTTCAGTCTCCATCGGAATGGACAGATCCAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAATATTAgtatctcccaagctctatcaggttggatgggcaGCGACGATGTAcaaccattttcagatctctccagagatgtttaataggatttaggtgtggcggtgtgctttgggtcattgtcctgctgtaagatgccccagtctgaggtcaagagcactctgaagcaggttttcattcaggatgtctctgtacattgctgcattcatctttccctctatcctgactagtcttctagttcctgctgctgaaaaacatccccacaccaccatgcttcactgtaggggtGGGATTAGCCTTATGATAAGCGGTGTCTGGTTTTCTATAAACGTAACACCTGgtgttcactccaaagagttcaattttagtctcattagacccgaattttgtttcttatggtctgagagtccttcagatgggtTAGTCCTAAAATCCAGGCGGGCCTCTACACCTAACACGCctgaatgctggagctcagacagattGACCATTGGGTAATTGATCACccccctgactaaggcccttctcccccgatcactcagcttagatggccagccagctctaggaagagtcctggtggttccaaacatcttccacttatcgatgatggaggccactgtgctcactggaactttcagagcagcagaaatcttTCTGTAACCTTCCACAGTCTTGTGGCTCAAGACAATCCTgcctcggaggtctacagacaattcctttgtcttcatgcttggtttgtgctttgacatgcactgtcaaccctgggaccctatatagacaggtgtatgtcttttcaaatcatgtccaattaactgaatttaccacaggtgaactccaattaagctgctgaaacatctcaagaatgatcagtggaaacagaatgtacctgagctccaTTTAGAGCTTCgcgcaaaggctgtgaatactgatgaacatctgatttttcaggttttctatttataataaatttgcaacaatttcaa
>TCONS_00030025
TTATTAACGAACTAAAAGCTGATATCTCAAACGCAAGTAGATACTCACAATGTTTGACTTGTCTGCATAAAGTCTCGGCGAGGTTTTGAATTAATTTTCTGTTCATCGCCGAcattttcagcatgttttactcTCTTTTTAGTCTTTGGTTGAATGTTGCTGTGGAAACGTGTAATGTGGGCGGGGCAATGTTGTGACGAGCAAGCGCTGCATACACAAACCAGGATACATCGATTTAACGCATTTTAACTTGTCGAGCGTTTCCCTTCAGGGACGCATTTTGCAAATTTATGAAGGTAATTCTTCGTTTAAAGTCGTATACCAGCGGATACAGTATGTGtggtCTGCCATACCTGATCTTTCTGGAAGGTTCTGGTGGCCTTCTGGAAGGACGATGGCAGAGTCAGCCAGCCCCGCAGGCATCGGGTGGAGGTGGAATCGCAGCGATATCCATGTTGACAACAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGAAGAGAGTGAACAAAGTTTGAGCATCGCAGTAAATCACAGAGGCAGAGGTGTCTACAGTCTCCACCGGGATAGACAGATCAAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAGTATTAgTGGTCTGCCATACCTGATCTTTCTCGAAGGTTCTGGTGGCCTCCTGGAAGGACGATGGCAGTGACAGCCAGCCTCGCAGGCATCGGGTGGAGGCGAAATTGCAACGATAACCGTGTCGACAGCAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGGAGAGAGTGAGCAAAGGTTAACCCTGTAACTATGAGTAGAAGAATATAAAAAACAAGATTCTCTTACCATTGGGAATGGACAACATGTCCATTTGCCATATGGAGTCCGACAGCATGTTGTTCTATCTGGACACACAGTTCGAGCATCGCAGTGAATCACAGAGGCAGAGACGTCTTCAGTCTCCATCGGAATGGACAGATCCAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAATATTAgtgtttgcaCACATTGACACTTGTCTGGATGGCTGGTTTTCTGAACTGACACTGTGCAGGATGGAAAGATGCTGCCTGAGCCAAAAGAGGCTGGATGGAGGCCACGGTGACTCTGAGGAACCAGTGTCCCGTCTGAACCCACACACATGAACATGAG
>TCONS_00028285
ATCGATTTAACGCATTTTAACTTGTCGAGCGTTTCCCTTCAGGGACGCATTTTGCAAATTTATGAAGGTAATTCTTCGTTTAAAGTCGTATACCAGCGGATACAGTATGTGtggtCTGCCATACCTGATCTTTCTGGAAGGTTCTGGTGGCCTTCTGGAAGGACGATGGCAGAGTCAGCCAGCCCCGCAGGCATCGGGTGGAGGTGGAATCGCAGCGATATCCATGTTGACAACAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGAAGAGAGTGAACAAAGTTTGAGCATCGCAGTAAATCACAGAGGCAGAGGTGTCTACAGTCTCCACCGGGATAGACAGATCAAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAGTATTAggtatgttattattttatctttttttattttatcagcacatttttgttttttattttattatattttgttttagtttaatttaggaCACTGCATattataaatgagtacacccc
>TCONS_00028286
ATCGATTTAACGCATTTTAACTTGTCGAGCGTTTCCCTTCAGGGACGCATTTTGCAAATTTATGAAGGTAATTCTTCGTTTAAAGTCGTATACCAGCGGATACAGTATGTGtggtCTGCCATACCTGATCTTTCTGGAAGGTTCTGGTGGCCTTCTGGAAGGACGATGGCAGAGTCAGCCAGCCCCGCAGGCATCGGGTGGAGGTGGAATCGCAGCGATATCCATGTTGACAACAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGAAGAGAGTGAACAAAGGTTAACCCTGTAACTATGAGTAGAAACATATTAACTCGAGATTCTGTTACCATTGAGTAAGGACAACATGACCATATGCCATATGGACTCAGACAGCATGTTGTTCCGTCTGGACACACAGTTTGAGCATCGCAGTAAATCACAGAGGCAGAGGTGTCTACAGTCTCCACCGGGATAGACAGATCAAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAGTATTAgTGGTCTGCCATACCTGATCTTTCTCGAAGGTTCTGGTGGCCTCCTGGAAGGACGATGGCAGTGACAGCCAGCCTCGCAGGCATCGGGTGGAGGCGAAATTGCAACGATAACCGTGTCGACAGCAGTGAATCCCATCCCTGCAACACTGACCCTGAAGCAGAGGAGAGAGTGAGCAAAGGTTAACCCTGTAACTATGAGTAGAAGAATATAAAAAACAAGATTCTCTTACCATTGGGAATGGACAACATGTCCATTTGCCATATGGAGTCCGACAGCATGTTGTTCTATCTGGACACACAGTTCGAGCATCGCAGTGAATCACAGAGGCAGAGACGTCTTCAGTCTCCATCGGAATGGACAGATCCAGCAGAGGCTCATCTGCAGCCACCAGAGCCGCCATGAGTAACATCAACACTGGGAACATCTGAAAATGTGAAATAGGAGAATATTAgtatctcccaagctctatcaggttggatgggcaGCGACGATGTAcaaccattttcagatctctccagagatgtttaataggatttaggtgtggcggtgtgctttgggtcattgtcctgctgtaagatgccccagtctgaggtcaagagcactctgaagcaggttttcattcaggatgtctctgtacattgctgcattcatctttccctctatcctgactagtcttctagttcctgctgctgaaaaacatccccacaccaccatgcttcactgtaggggtGGGATTAGCCTTATGATAAGCGGTGTCTGGTTTTCTATAAACGTAACACCTGgtgttcactccaaagagttcaattttagtctcattagacccgaattttgtttcttatggtctgagagtccttcagatgggtTAGTCCTAAAATCCAGGCGGGCCTCTACACCTAACACGCctgaatgctggagctcagacagattGACCATTGGGTAATTGATCACccccctgactaaggcccttctcccccgatcactcagcttagatggccagccagctctaggaagagtcctggtggttccaaacatcttccacttatcgatgatggaggccactgtgctcactggaactttcagagcagcagaaatcttTCTGTAACCTTCCACAGTCTTGTGGCTCAAGACAATCCTgcctcggaggtctacagacaattcctttgtcttcatgcttggtttgtgctttgacatgcactgtcaaccctgggaccctatatagacaggtgtatgtcttttcaaatcatgtccaattaactgaatttaccacaggtgaactccaattaagctgctgaaacatctcaagaatgatcagtggaaacagaatgtacctgagctccaTTTAGAGCTTCgcgcaaaggctgtgaatactgatgaacatctgatttttcaggttttctatttataataaatttgcaacaatttcaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060104-1 No description available

Ensembl:

ensembl_id ENSDARG00000091885 ENSDARG00000116443

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028283 False 123 mRNA 0.42 6 40171960 40210392
TCONS_00030022 False 1110 lncRNA 0.50 4 40185903 40212192
TCONS_00030023 False 808 lncRNA 0.44 4 40186156 40192318
TCONS_00030024 False 2095 lncRNA 0.46 5 40186156 40205470
TCONS_00030025 False 1278 lncRNA 0.48 5 40186156 40212192
TCONS_00028285 False 554 lncRNA 0.43 3 40186385 40191499
TCONS_00028286 True 1987 lncRNA 0.46 4 40186385 40205470

Neighbor

gene id symbol gene type direction distance location
XLOC_014226 si:ch211-173p18.3 coding upstream 6161 40115977 ~ 40165799 (+)
XLOC_014225 zmym4 coding upstream 58025 40069524 ~ 40113935 (+)
XLOC_014224 NA coding upstream 105369 40057836 ~ 40066591 (+)
XLOC_014223 sfpq coding upstream 116569 40025928 ~ 40055391 (+)
XLOC_014222 BX957260.1 coding upstream 202502 39927406 ~ 39969458 (+)
XLOC_014229 cdk6 coding downstream 36505 40248697 ~ 40328549 (+)
XLOC_014230 NA coding downstream 116520 40328712 ~ 40333094 (+)
XLOC_014231 fam133b coding downstream 123079 40335271 ~ 40347943 (+)
XLOC_014232 hepacam2 coding downstream 138276 40350468 ~ 40374428 (+)
XLOC_014233 vps50 coding downstream 167579 40379771 ~ 40686675 (+)
XLOC_014221 BX957260.2 non-coding upstream 297013 39874831 ~ 39874947 (+)
XLOC_014220 NA non-coding upstream 419786 39750058 ~ 39752174 (+)
XLOC_014219 NA non-coding upstream 756259 39409323 ~ 39415701 (+)
XLOC_014234 NA non-coding downstream 480236 40692428 ~ 40736984 (+)
XLOC_014238 CR749767.1 non-coding downstream 746308 40958500 ~ 40958616 (+)
XLOC_014243 NA non-coding downstream 975620 41187812 ~ 41191519 (+)
XLOC_014244 NA non-coding downstream 1021616 41233808 ~ 41238528 (+)

Expression


Co-expression Network