CI01180000_00737754_00743866


Basic Information

Item Value
gene id CI01180000_00737754_00743866
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 735310 ~ 744211 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_00737754_00743866.mRNA
GCTATAAAAGCAGCAGGGTATCTGACCACTACACCAGCACACACACACACATGAACATCGTCCACTCCCAGACTGCATGGACACGCCCTTACACAGCATCCACTGATCAACCCCGGCTCACTTCATCTCGCACAGTGCATCTTCCCATCCTTTCCGTTCACTTTCAGTTCCAAGATATTCAAGATTTTTATTTGTCATGAATAATGTTGACTTTTGTTCCTCTCTTGTAAGTCGCTTTGGATAAAAGAATCTGCTAAATGTTTTGAGCGGTTTTGATTAGAAAAAAGGATTAGAAGTCAATGAACAAATAGCAATAAGGCAACGAGTAGCCAAATGTTTTTTGACTTCTAATCCTTCATACTTCATACAACCGTTCAAACACACTTTAAGGGGCCATTTACACAAAACTAAAAACGTAAAACTTTTTATGCATTCATTCACGCGAAAATGGCGTTTTGGGTGCCTGAAAATGGAAATGTTGAAATCGGGTTTTAAAGTGCAAGTTTTTTAAAACTATAGCGTTGTCGTTTCCATGTAAACTACAATAACACGAATTTGTGAAAACGGTGACGCCATGCACATTACATGTTCAGTCTTTAGGCGCGTAGTGTTTCTCTACAAAGTGACATCGCCATCTACTGGCCTGGCATGAATAATACAGCGTTTTTAGTCGTTTTCACAGATCCGTGTGAACCGGGATCGTTTTGATAATGGTGTCGTCTGTACGCAAAAAACATCATTGTTGTGTAAACATAACCTTAATTTAAAAAAATCAATTAATGCAGAAATTGGAGTTTAAGGGGCCGTTTACACTACACCGTTTTCAACTAAAACCAGAAAACTTTTTATGCATTTTGGACGTTCATTTACACGACAATGCCGTTTTGGGTGCCTGAAAATGGAAACTTTTGAAAACGGGTTTTAAAGTTTTTGAAAACTATAGCGTTATCATCTCCATGTAAATTACAAATACACAAATTTGTGAAAATGGTGACGTAATGCGCATTATATGTTCAGTCTATAGACGCGAAGTGTTTCTTAACAAAGTGACATCGCCATCTACTGGCCTGGCATGAATAGTACAGCGTTTTTAGTTGTTTTTGTGGATCCGTGTGAACCGGGATCGTTTTGATAATGGTTTCGTCTGTACGCAAAAAAAAAGCAAAGGAAAAACTTCTCCGTTTTTAGTACATCATTGTTGTGTAAATATACCCTTAATTTTAAAAAATCAATTAACGCAGAAATTTGAGTTTAAGGGGCCGTTAGCACGACATCGTTTTCAACTAAAACCGGAAAACATTTTATGCGTTTTGGACGTTTATTTATATGACAACAGCGTTTTGGGGGCCTGAAGATGGAAACTTTTGAAATTAGGTTTCAAAGTGCAAGTTTTTGAAAACAATACCGTTATCGTCTCCATGTAATCTACAAAAACACAAATTTGTGAAAACGGTGACGTCATGCACATTACATGTTCAGTCTATAGATGCGTAGTGTTTCTTTACAAATTGACATCGCCATCTACTGGCCTGGCATGAATAATACAGCGTTTTTAGTCGTTTTTGCAGATTCGTGTGAACAGGATCGTTTTGATAATGGTTTGGTCTGTACACAAAAAAAAAGCAATGGAAAAACTTTTCCATTTTTTGCACATTATTGTTGTGTAAACATACCCTAAATTTAAAAAAAATCTATTAACTTAGAAATTTGAGTTTAAGTAGCCGTTTACACGACACCATTTTCAACTAAAACTGGAAAACTTTGTATGCGTTTTGGACTTTCATTTACACGACAACAGCGTTTTGAATGCCTGAAAATGGAAACTTTTGAAAACGGGTTTTTTGAATACCGTTATCGTCTCCATGTAAACTACAAAAAAACACAAATTTGTGAAAACGGTGTTTACGTGTGTTACGTGTTCAGTCGGCGGGTAGTGTTTCTTTACAAAGTGACATCGCCAACTACTGGCCTGGCATGAATAATACAGCATTTTTAATAATTTTCGCAGATCCGTGTGAACGGGATAGTTTTGACAACTTTGTCATCTGTACGCGCAAAATGCAATGGAGTAACTTTTCCATTTTCAGTACATTGTTGTTGTGTAAGTCAACACGCAAACTATTTAACTCATAATACTGCTGTATTTCTGAATTTAAATAGGAAATTCAATGAAAAAATATGAAAGGTGGGACTTTATTTTTTATTAGTTGAGAATTTATTGAATCAGATAAATTGGGAAAGTCATGAAAATTCTGTGATGTCAGGCATTTTTATTCCATGTTGACTTTAACGAAGGACATGTTCTTGGATCAACACGCTTGTTGGTCTTGGAGCAACATTCCGATCGACAAATCAGATTTTAGGGTTACAACATTTTTATCAACCAATTATTTGCTTCTAATTATAAGTGCAAAGGATGTTTGATAGAAATGTTATTCAAGGACCATGTCCATAGCCTGCATGGCAAATGGTGGTCAAACACCAACCCCAGTGGCAAACAGGTGGCTCCTTAACACATTCTTTGTCCTCAGAAGCAACACAAAGACACACTTATTCCTATTCTCAGGCGATGTTAGGGTAAGATGCGTGAGTGAGAAGTCTTGTGCGACTGCTTTTGCAACCATGTGTGAGAACAGCACTTTGATGTCGAATTTCACGGCATTCTTACAATCGGAATCATTTAAACGCGCGCATTCCTTCGCTTCTGCCATGTGCTCGAATCCAGCAAACAACTTCTTTTGTGATCGAGGACACTTGCTCAAGTGTTCTCGCGCACTTCTGAGTGGAATACCGATATTGTACATTATTTTGAGCGTCACTCTTTTGTCTTTGCCCGACACTGATAGCGAATTCCCGCGAAACTCTTTGAGTGAACAAATCGAATTTAAAAATGTTTCAACGTTCCATTCGTTTGTGATTGGATTCTATTGTCTGTTCACATTTGTATATGTGGGTAGTTGATTAATAACCTGAATATGAACTTTTTAACATGTTTTTTTTAATTATTATTATTATTATTAATCATACTAAAAGATCATATATGATTGGTTAATACACACATATTTTCTAGTTCACATCATAACGTTACATTTATTTGAATTTATATACTTTTAGATGCTATTTTTATTTTATTTTTAGTTTAAGCGACTTGAGACAATTTAAACCTCATGTCTCTCAATTAATAGAGGTCAAAAATGTACGGGAAATGTTTAAAAATAGTTTTGGATGGAGCATGTCAACTATCAACATTTATGACTGAACTATTAAAGATTGATATTTGCCAATATCTAAATCTTTTTAATTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_00737754_00743866.mRNA True 3305 mRNA 0.36 3 735310 744211

Neighbor

gene id symbol gene type direction distance location
CI01180000_00661446_00671602 MSH6 coding upstream 63122 661109 ~ 672188 (+)
CI01180000_00427700_00437883 NA coding upstream 296844 427650 ~ 438466 (+)
CI01180000_00368639_00375465 ZC3H6 coding upstream 359063 368639 ~ 376247 (+)
CI01180000_00361420_00364335 NA coding upstream 370184 361420 ~ 365126 (+)
CI01180000_00306160_00314770 NA coding upstream 419566 306160 ~ 315744 (+)
CI01180000_00765917_00776252 NA coding downstream 21586 765797 ~ 776911 (+)
CI01180000_00812535_00858607 NA coding downstream 67646 811857 ~ 859005 (+)
CI01180000_00862066_00867985 NA coding downstream 116535 860746 ~ 868112 (+)
CI01180000_00947514_00949868 NA coding downstream 202210 946421 ~ 950906 (+)
CI01180000_00955725_01050852 SIPA1L2 coding downstream 210711 954922 ~ 1051826 (+)
G678712 NA non-coding upstream 12853 722123 ~ 722457 (+)
G678654 NA non-coding upstream 20464 714434 ~ 714846 (+)
G678703 NA non-coding upstream 36256 698675 ~ 699054 (+)
G678632 NA non-coding upstream 50267 677874 ~ 685043 (+)
G678595 NA non-coding upstream 184136 503871 ~ 551174 (+)
G678640 NA non-coding downstream 3054 747265 ~ 777004 (+)
G678633 NA non-coding downstream 33396 777607 ~ 779619 (+)
G678629 NA non-coding downstream 35583 779794 ~ 780590 (+)
G678717 NA non-coding downstream 39704 783915 ~ 784202 (+)
G678720 NA non-coding downstream 42150 786361 ~ 786662 (+)
G678440 NA other upstream 583658 147934 ~ 151652 (+)
G678751 NA other downstream 315632 1059843 ~ 1066091 (+)
G678637 NA other downstream 405340 1149551 ~ 1155672 (+)
G678946 NA other downstream 774142 1518353 ~ 1612547 (+)
G679076 NA other downstream 1050959 1795170 ~ 1799433 (+)
G679324 NA other downstream 1644656 2388867 ~ 2397360 (+)

Expression


Co-expression Network