CI01180000_02362001_02362428


Basic Information

Item Value
gene id CI01180000_02362001_02362428
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 2361960 ~ 2363530 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_02362001_02362428.mRNA
AAAATAAATACACAGACCATGACCCAGTCAAAGTGACAGATAATGATTATAGAGAAAGTTCAAATGAACGAGACGAAGCTCTGCATTTCTCTTGCACACTCATGTTTAATTTTGCCCTCACAGGTCAGCGCAGTGGAGATGAAACGCTTCCAGTGTTTTAGCATTAAGAGGCGTTTCTCTGTTTGCTTCATGCAGGTGAGTGAGTGTCAGAGAGCTGTGCAATACATCTTTAATGCAGCTCTGCAGATGCAACGGCCTAAACACAGAGACACAGAAACAAATGGAGGAGATGAACATAAGAATGAGAAAATCTCACAGATGGACACAAATAATACAAAAGTATGACAAAAAAAAAAAATTTATTGTTTTTTTTGTTTTTTTCTGGCCAGAATATATTTCAAATATATGTTAAATACTGTCTATGTATGTTGTAAACAGCATCGCTTCATGAAATATACATATTTTTCATATGTACACAGCCACAGCCACCTGGGAATACCATTTCCATGAAAGGGTGTACATGGTCTGCAACAATGCTTAGGTAGGTGGTACGTGTCAAAGTAACATCCACATGGATGGCAGGACCCAAGGTTTCCCAGCAGAACATTGCCCAAAGCATCACACTGCCTCCACCGGTTTGCCTTCTTCCCATAGTGCACCTGGTTCCATGTGTTCCCCAGGTAAGCAACGCACACGCACCCGGCCATCCACGTGATGTAAAAGAAAACGTGATTCATCAGACCAGGCCACTTTCTTCCATTGCTCCGTGGTCCAGTTCTGATGCTCACGTGTCCACTGTTGGCTCTTTCGGCGGTGGACAGGGGTCAGCATGAGCACCCTGACTGGTCTGCAGCTATGCAGCTCCATACGCAACAAACTGTGATGCACTGTGTATTCTGACACCTTTCTATCAGAACCAGCATTAACTTCTTGAGCAATTTGAGCTACAGTAGCTCATCTGTTGGATCGAACCACACGGGCCAGCCTTCGCTCCCCACGTGCATCAATGAGCCTTGGCCGCCCATGACCCTGTCGCCGGTTCACCACTGTTCTTTCCTTGGACCACTTTTGATAGATACTGACCACTGCAGACCGGGAACACCCCACAAGAGCTGCAGTTTTGGAGATGCTCTGACCCAGTCGTCTAGCCATCACAATTTGGTCCTTGTCAAACTCGCTCATTTTTCCTGCTTCTAACACATCAACTTTAAAATGTTCACTTGCTGCCTAATATATCCCACCCACTAACAGGTGCCGTGATGAAGAGATAATCAGTGTTATTCAAACAAAGAATCACATGATTTGAGAAGATCTGAAATATAGTGCACGAGTCATATGTCATTTGTGGAGTTGAGTAAATAATGGATTTTCATTTTTGGCTAAACTATTCCAGTAAGGACAGACAGACGACAAAATGGTTTTTGTAATATTTGATTTAAATGTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_02362001_02362428.mRNA True 1446 mRNA 0.43 2 2361960 2363530

Neighbor

gene id symbol gene type direction distance location
CI01180000_02322594_02323609 NA coding upstream 38208 2320352 ~ 2323752 (+)
CI01180000_02158036_02158965 HS3ST1L1 coding upstream 202738 2157350 ~ 2159222 (+)
CI01180000_01942458_01949580 NA coding upstream 411313 1942127 ~ 1950647 (+)
CI01180000_01915282_01926129 NA coding upstream 435691 1914892 ~ 1926269 (+)
CI01180000_01865632_01870994 NA coding upstream 490871 1865509 ~ 1871089 (+)
CI01180000_02541296_02567509 CFAP46 coding downstream 177766 2541296 ~ 2567783 (+)
CI01180000_02574027_02588521 NA coding downstream 210497 2574027 ~ 2588824 (+)
CI01180000_02613130_02639905 NA coding downstream 248748 2612278 ~ 2639922 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 coding downstream 325741 2689271 ~ 2693221 (+)
CI01180000_02951792_02968343 STK32C coding downstream 588262 2951792 ~ 2968343 (+)
G679047 NA non-coding upstream 120087 2238490 ~ 2241873 (+)
G679218 NA non-coding upstream 147026 2210789 ~ 2214934 (+)
G679228 NA non-coding upstream 160525 2197189 ~ 2201435 (+)
G679050 NA non-coding upstream 233973 2121269 ~ 2127987 (+)
G679204 NA non-coding upstream 255867 2099698 ~ 2106093 (+)
G679346 NA non-coding downstream 78745 2442275 ~ 2442571 (+)
G680148 NA non-coding downstream 208882 2572412 ~ 2572739 (+)
G680180 NA non-coding downstream 272245 2635775 ~ 2664245 (+)
G680204 NA non-coding downstream 319704 2683234 ~ 2683580 (+)
G679076 NA other upstream 562527 1795170 ~ 1799433 (+)
G678946 NA other upstream 805809 1518353 ~ 1612547 (+)
G678637 NA other upstream 1206288 1149551 ~ 1155672 (+)
G678751 NA other upstream 1295869 1059843 ~ 1066091 (+)
G678440 NA other upstream 2210308 147934 ~ 151652 (+)
G679324 NA other downstream 25337 2388867 ~ 2397360 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 1189747 3569165 ~ 3573135 (+)
G680736 NA other downstream 1402161 3765691 ~ 3784441 (+)
G681137 NA other downstream 2419775 4783305 ~ 4785631 (+)

Expression


Co-expression Network