CI01180000_03119632_03122277


Basic Information

Item Value
gene id CI01180000_03119632_03122277
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3119472 ~ 3124069 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_03119632_03122277.mRNA
CTGACGTGTTTATGCCGTGTGTCGTGGAATGCTGCTTATTTATTGATGGTTTTGGCTCTTCTGTATCTGTTTTATTCAGAGCGTTTGTTCTCTATCATAGTGAGTAGATCTGCAAATAAATATATATAAACGTATTACTCCACTGCATTGTGATGTTTGTTGATATCCTCAATAAAGGTTTCATTTCTGGACTTTCTCATGATTCTATATCAGTGTATGTTTAATAATTTTGGTCTGTTTTTATATTGAGATCAAGTGCTTTGAATGTTATTTAATAAATAATTAAACAGTTTAATAATGTACATTTTGAGTATTACTGCTGTTTTCATTTTTTTCTGGGTGTTATTTGCATATAAACGTGTTTTCTAATATGCAAGAATCAATCCTGATTAAATTGGTGCACACAAACAAAATTCTTCCTGTTCTTCCTCAGTGTTTCCAGCACAAATATCTATACGTCCTTAAATCAAGATACATTTACTGGAGAAGCAAAATGACTGAAGATATCAAGTCTTGTTTACTGAAAAATGTCTCAAAATGAAGTGAGTTTGTGCTGAAAACAAGAACAAATATCTGCCAATGGGGTCAGAAAAATAATCTTGTTTTCCTTTTGAATAAAGTTTATTTTTCTGACCACATTGGCAGATATTTGTTCTTGTTTTAAGCATAAAGTCATTTAATTATGATAATTTTAAAGCTTCTTAAAGGCACAATATGTAAGATTTTTGGATTAAAATATCCAAAAACCACTAGAACAATGTTATATATTTTGTTGACCTGTGTATTTGCATTATCCCAAATGTTTCCAATAATGTTTAAATCCAGAGAAATAAGCAATTTTAATCAGGACACGGACCGTGCGTCGCCTATCAATGATATCATACACGCGTTACCCTCGATTTCCGGTTTTATTTTGTAGAAACCATGGAAACACCAAAGACGTTTTAATATTTTATGTGTTTTATTAGACAGGTGAGCAACTGTTTGGATACATTCATCGACAGAAAACTAATCATGTTATATAGCTCAACACAGTAAGTCTTATTGTTTAAATCTCGTTTTCTTGATTTACCGCGAGTACCATGTTTTACCATGTCTAATACTGATCTAGTTTACTGCAGTGTGCAACAAGTGTCTCATAGCAGCCGTCGAACGAACGCACAGAGTAGCATTATAACAACTTTCAACACACAAATGTATCTAATATAATAAAACAGCGCTGCGTTACCCCACATACGCATGACCGGAAGAAGTGGAAGAGCTCGTCTGTGGCATAATAAAGGCTCCACTGCTCTCGAGTCGTGTGTCGCGCTCGTCTCTCATTAGCAATCGCTCCAGCGGCCTCATTCCGCTCCAAAGGCTTTCAGCCACACCCTGCTTCATACTACGTTCATGTTAATAAATCTTTAATACATTAGCTCATCCATGAATATGATTTCTGCCTGAGTCCCAACAGATTCTTTTCCACCGGCTGTAGACGTGAAGACAACACCTCCCATGATTCCGTGAATTTAAGGCGTCATCAAGCTACGCCTTTGTTTTGGATAAGCGACCTCTAGTGGCGAAAAATTACATATTGTGCCTTTAAGTAAATGCTATCTTGATTTAAGAATGTTTAGATATTTGTACTGGAAAACAAGACAGAAACACTGAGGAAGAACACCATGATTTTGCAGTGTGTGCATGCTAAGCACACTAGACCCAGGCAGAGTGGGTGTGTGTGAATGTGTGTGTTGTCCAGTGCAGTGTATTGAGTGTGTGTGTGTGTGTGTGTAGGATGGCAGCGGCGCAATGCAGCGCAGCGGCTCCATGGGGCGGCTCAGAGATGTGTTGCGCCGGAGCAGCGAGATGCTGGTGAAGAAGCTGCAGGGCCAGGGACCTCCAGAAATGCAAGACAACACGATGAAACGTGCCGCTTCACTCAACTTCCTGAACAAGACGGTTGACGAGCCCTACCAGGATCTGAGCAGGCGGCAGAGAATCAGTCAAGGTTTGAGCTCCAGTTATGTGGATCTGTACAACTTCAGATAAATCTGTCCAAGACGAACCACTGCACTGCTCTCAACTTACACACACACACACACACACACACACACTCAAAGCTTTAGACACTCCAAAATTACTGTCACCCTGAAATGTTCCAGCATGGCCTCATGACAACCACTGTTACGCTACAAAGCCATAAAATAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_03119632_03122277.mRNA True 2192 mRNA 0.39 3 3119472 3124069

Neighbor

gene id symbol gene type direction distance location
CI01180000_03054067_03071659 NA coding downstream 47813 3053345 ~ 3071659 (-)
CI01180000_03023998_03049321 SRF coding downstream 70151 3023838 ~ 3049321 (-)
CI01180000_03016426_03018342 NA coding downstream 101130 3014433 ~ 3018343 (-)
CI01180000_02988807_02995955 NA coding downstream 122071 2987081 ~ 2997401 (-)
CI01180000_02894674_02906257 NA coding downstream 213173 2894529 ~ 2906299 (-)
CI01180000_03127734_03141242 KLC1B, KLC4 coding upstream 3665 3126289 ~ 3141242 (-)
CI01180000_03156666_03178903 NA coding upstream 31756 3155825 ~ 3178903 (-)
CI01180000_03201997_03203649 LARP7 coding upstream 76941 3201010 ~ 3204182 (-)
CI01180000_03235330_03238451 NA coding upstream 110282 3234351 ~ 3238451 (-)
CI01180000_03242704_03242928 YPEL5 coding upstream 118106 3241341 ~ 3242929 (-)
G680619 NA non-coding downstream 67193 3051541 ~ 3052279 (-)
G680593 NA non-coding downstream 216803 2902394 ~ 2902669 (-)
G680590 NA non-coding downstream 223704 2895555 ~ 2895768 (-)
G680587 NA non-coding downstream 271911 2844897 ~ 2847561 (-)
G680564 NA non-coding downstream 352032 2767334 ~ 2767440 (-)
G680649 NA non-coding upstream 72859 3196928 ~ 3197254 (-)
G680665 NA non-coding upstream 139766 3263835 ~ 3264983 (-)
G680673 NA non-coding upstream 156162 3280231 ~ 3285385 (-)
G682663 NA non-coding upstream 301440 3425509 ~ 3426343 (-)
G680506 NA other downstream 267556 2771047 ~ 2851916 (-)
G680525 NA other downstream 502716 2616354 ~ 2616756 (-)
CI01180000_01776944_01781186 NA other downstream 1337984 1776872 ~ 1781339 (-)
CI01180000_04796238_04797552 NA other upstream 1672191 4796176 ~ 4797842 (-)
G683394 NA other upstream 2494138 5618207 ~ 5619271 (-)
G683294 NA other upstream 2626975 5751044 ~ 5755526 (-)
G683673 NA other upstream 3638006 6762075 ~ 6762844 (-)

Expression


Co-expression Network