G680239


Basic Information

Item Value
gene id G680239
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 2764022 ~ 2764255 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU801078
CAATATTGGCAGACAGGTCATTGCAAATAAAATAAGATTATAAAATAAAAATCAAATAATAAATAAAATAAGAGCTAATTAAGTAAAATAAAGATTATAAAATAAAAAATAAATAAAAAATAATAAAATAAAATAAGAGCTAATTAAGTAAAATAAAATAAGATTATAAAATTAAAAAAATAAATAAATAAAATAAAATATTCCTTTAAATATGGACAGAAAACACAATATCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU801078 True 234 lncRNA 0.15 1 2764022 2764255

Neighbor

gene id symbol gene type direction distance location
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 coding upstream 71839 2689271 ~ 2693221 (+)
CI01180000_02613130_02639905 NA coding upstream 124100 2612278 ~ 2639922 (+)
CI01180000_02574027_02588521 NA coding upstream 175198 2574027 ~ 2588824 (+)
CI01180000_02541296_02567509 CFAP46 coding upstream 196239 2541296 ~ 2567783 (+)
CI01180000_02362001_02362428 NA coding upstream 400492 2361960 ~ 2363530 (+)
CI01180000_02951792_02968343 STK32C coding downstream 187537 2951792 ~ 2968343 (+)
CI01180000_02998131_03010201 NA coding downstream 233876 2998131 ~ 3010503 (+)
CI01180000_03077007_03078238 NA coding downstream 312352 3076607 ~ 3078799 (+)
CI01180000_03149731_03154047 NA coding downstream 384792 3149047 ~ 3154088 (+)
CI01180000_03210894_03214195 LBH coding downstream 446639 3210894 ~ 3214720 (+)
G680227 NA non-coding upstream 24487 2738717 ~ 2739535 (+)
G680204 NA non-coding upstream 80442 2683234 ~ 2683580 (+)
G680180 NA non-coding upstream 99777 2635775 ~ 2664245 (+)
G680148 NA non-coding upstream 191283 2572412 ~ 2572739 (+)
G680241 NA non-coding downstream 4169 2768424 ~ 2769025 (+)
G680242 NA non-coding downstream 6533 2770788 ~ 2771029 (+)
G680263 NA non-coding downstream 41406 2805661 ~ 2806462 (+)
G680294 NA non-coding downstream 89552 2853807 ~ 2854022 (+)
G680296 NA non-coding downstream 93069 2857324 ~ 2858311 (+)
G679324 NA other upstream 366662 2388867 ~ 2397360 (+)
G679076 NA other upstream 964589 1795170 ~ 1799433 (+)
G678946 NA other upstream 1207871 1518353 ~ 1612547 (+)
G678637 NA other upstream 1608350 1149551 ~ 1155672 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 789022 3569165 ~ 3573135 (+)
G680736 NA other downstream 1001436 3765691 ~ 3784441 (+)
G681137 NA other downstream 2019050 4783305 ~ 4785631 (+)
G681268 NA other downstream 2606155 5370410 ~ 5373762 (+)
G681592 NA other downstream 3708780 6471995 ~ 6478999 (+)

Expression


Co-expression Network