Gene
RNA
| Item | Value |
|---|---|
| gene id | G680241 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 2768424 ~ 2769025 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU801080 | True | 602 | lncRNA | 0.50 | 1 | 2768424 | 2769025 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_02690045_02691641 | NKX6-2, NKX6-2.L, NKX6.2 | coding | upstream | 76241 | 2689271 ~ 2693221 (+) |
| CI01180000_02613130_02639905 | NA | coding | upstream | 128502 | 2612278 ~ 2639922 (+) |
| CI01180000_02574027_02588521 | NA | coding | upstream | 179600 | 2574027 ~ 2588824 (+) |
| CI01180000_02541296_02567509 | CFAP46 | coding | upstream | 200641 | 2541296 ~ 2567783 (+) |
| CI01180000_02362001_02362428 | NA | coding | upstream | 404894 | 2361960 ~ 2363530 (+) |
| CI01180000_02951792_02968343 | STK32C | coding | downstream | 182767 | 2951792 ~ 2968343 (+) |
| CI01180000_02998131_03010201 | NA | coding | downstream | 229106 | 2998131 ~ 3010503 (+) |
| CI01180000_03077007_03078238 | NA | coding | downstream | 307582 | 3076607 ~ 3078799 (+) |
| CI01180000_03149731_03154047 | NA | coding | downstream | 380022 | 3149047 ~ 3154088 (+) |
| CI01180000_03210894_03214195 | LBH | coding | downstream | 441869 | 3210894 ~ 3214720 (+) |
| G680239 | NA | non-coding | upstream | 4169 | 2764022 ~ 2764255 (+) |
| G680227 | NA | non-coding | upstream | 28889 | 2738717 ~ 2739535 (+) |
| G680204 | NA | non-coding | upstream | 84844 | 2683234 ~ 2683580 (+) |
| G680180 | NA | non-coding | upstream | 104179 | 2635775 ~ 2664245 (+) |
| G680242 | NA | non-coding | downstream | 1763 | 2770788 ~ 2771029 (+) |
| G680263 | NA | non-coding | downstream | 36636 | 2805661 ~ 2806462 (+) |
| G680294 | NA | non-coding | downstream | 84782 | 2853807 ~ 2854022 (+) |
| G680296 | NA | non-coding | downstream | 88299 | 2857324 ~ 2858311 (+) |
| G680219 | NA | non-coding | downstream | 108286 | 2877311 ~ 2889630 (+) |
| G679324 | NA | other | upstream | 371064 | 2388867 ~ 2397360 (+) |
| G679076 | NA | other | upstream | 968991 | 1795170 ~ 1799433 (+) |
| G678946 | NA | other | upstream | 1212273 | 1518353 ~ 1612547 (+) |
| G678637 | NA | other | upstream | 1612752 | 1149551 ~ 1155672 (+) |
| CI01180000_03571292_03571611 | GNG2.L, GBG2, GNG2 | other | downstream | 784252 | 3569165 ~ 3573135 (+) |
| G680736 | NA | other | downstream | 996666 | 3765691 ~ 3784441 (+) |
| G681137 | NA | other | downstream | 2014280 | 4783305 ~ 4785631 (+) |
| G681268 | NA | other | downstream | 2601385 | 5370410 ~ 5373762 (+) |
| G681592 | NA | other | downstream | 3704010 | 6471995 ~ 6478999 (+) |
