G680242


Basic Information

Item Value
gene id G680242
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 2770788 ~ 2771029 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU801081
TCCGGCGGGGGCTAATGCTGACACCGGTGTAATGGGAGTGGCTTTAATTAGTGTGACCGTCGGGACACGCGACCTCTGACCCCTACCGCTGATGAGGTCACCGCTGCTAACTGTCCAATAGCTTGAGTGCACTATTACCAGAGGCTGAAATCTCATGAATTAAATCCTAATATTAATAAGCATTACTGTTTCCTATCGGTAACTCCGTCTTAGCATGTTTTATAGCTTCTGAAACAACCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU801081 True 242 lncRNA 0.47 1 2770788 2771029

Neighbor

gene id symbol gene type direction distance location
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 coding upstream 78605 2689271 ~ 2693221 (+)
CI01180000_02613130_02639905 NA coding upstream 130866 2612278 ~ 2639922 (+)
CI01180000_02574027_02588521 NA coding upstream 181964 2574027 ~ 2588824 (+)
CI01180000_02541296_02567509 CFAP46 coding upstream 203005 2541296 ~ 2567783 (+)
CI01180000_02362001_02362428 NA coding upstream 407258 2361960 ~ 2363530 (+)
CI01180000_02951792_02968343 STK32C coding downstream 180763 2951792 ~ 2968343 (+)
CI01180000_02998131_03010201 NA coding downstream 227102 2998131 ~ 3010503 (+)
CI01180000_03077007_03078238 NA coding downstream 305578 3076607 ~ 3078799 (+)
CI01180000_03149731_03154047 NA coding downstream 378018 3149047 ~ 3154088 (+)
CI01180000_03210894_03214195 LBH coding downstream 439865 3210894 ~ 3214720 (+)
G680241 NA non-coding upstream 1763 2768424 ~ 2769025 (+)
G680239 NA non-coding upstream 6533 2764022 ~ 2764255 (+)
G680227 NA non-coding upstream 31253 2738717 ~ 2739535 (+)
G680204 NA non-coding upstream 87208 2683234 ~ 2683580 (+)
G680263 NA non-coding downstream 34632 2805661 ~ 2806462 (+)
G680294 NA non-coding downstream 82778 2853807 ~ 2854022 (+)
G680296 NA non-coding downstream 86295 2857324 ~ 2858311 (+)
G680219 NA non-coding downstream 106282 2877311 ~ 2889630 (+)
G680303 NA non-coding downstream 118826 2889855 ~ 2890291 (+)
G679324 NA other upstream 373428 2388867 ~ 2397360 (+)
G679076 NA other upstream 971355 1795170 ~ 1799433 (+)
G678946 NA other upstream 1214637 1518353 ~ 1612547 (+)
G678637 NA other upstream 1615116 1149551 ~ 1155672 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 782248 3569165 ~ 3573135 (+)
G680736 NA other downstream 994662 3765691 ~ 3784441 (+)
G681137 NA other downstream 2012276 4783305 ~ 4785631 (+)
G681268 NA other downstream 2599381 5370410 ~ 5373762 (+)
G681592 NA other downstream 3702006 6471995 ~ 6478999 (+)

Expression


Co-expression Network