G680331


Basic Information

Item Value
gene id G680331
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3051549 ~ 3052025 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU801181
GAGCAGCATTACATCTGGATTACTGTGACCTTTACTAAAGCAGAATATAAAAGCATCACGGTGTGAGAGAACAACAGTGAACAGACAGTGAGGATGAACTCACAGAGATTAAAACAAACGACAAATAAAACAACAATAATAAAAAAATACATGAAACGATTATATAAAAGCAGTTCTTAAAAACAATAAGCTTTAACGGCATTACAAAAGACACTGTAAAAAAAAAAAAAAAAAAAAAAACCCAGCAAATAAGTCCTTCATGTTCTAGGCACTTTTAGTATTAAAAGTCAGAATTGACCTGATGAAAACCACTGAGCGCGAAACAGTCCAGATGAGTTTCTGCTGCGGGACGGGAGAATAAAACCAACACTGGCTGTGTTAAAATCACAGAACCTTCATCATAAATACAAACATCTCAACCTCTGACTCCACGGCCCACAATAATATCTGCTGTAATGAAAAAGATTGGTTTTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU801181 True 477 lncRNA 0.35 1 3051549 3052025

Neighbor

gene id symbol gene type direction distance location
CI01180000_02998131_03010201 NA coding upstream 41046 2998131 ~ 3010503 (+)
CI01180000_02951792_02968343 STK32C coding upstream 83206 2951792 ~ 2968343 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 coding upstream 359366 2689271 ~ 2693221 (+)
CI01180000_02613130_02639905 NA coding upstream 411627 2612278 ~ 2639922 (+)
CI01180000_02574027_02588521 NA coding upstream 462725 2574027 ~ 2588824 (+)
CI01180000_03077007_03078238 NA coding downstream 24582 3076607 ~ 3078799 (+)
CI01180000_03149731_03154047 NA coding downstream 97022 3149047 ~ 3154088 (+)
CI01180000_03210894_03214195 LBH coding downstream 158869 3210894 ~ 3214720 (+)
CI01180000_03223456_03224643 LCLAT1 coding downstream 171377 3223402 ~ 3224643 (+)
CI01180000_03250547_03255754 KLHDC3 coding downstream 198522 3250547 ~ 3255868 (+)
G680349 NA non-coding upstream 83792 2966958 ~ 2967757 (+)
G680309 NA non-coding upstream 147385 2903841 ~ 2904164 (+)
G680308 NA non-coding upstream 148880 2902448 ~ 2902669 (+)
G680306 NA non-coding upstream 155616 2895526 ~ 2895933 (+)
G680304 NA non-coding upstream 158110 2893159 ~ 2893439 (+)
G680317 NA non-coding downstream 71766 3123791 ~ 3179566 (+)
G680424 NA non-coding downstream 113463 3165488 ~ 3169456 (+)
G680441 NA non-coding downstream 160988 3213013 ~ 3280015 (+)
G680705 NA non-coding downstream 335202 3387227 ~ 3387686 (+)
G680706 NA non-coding downstream 336263 3388288 ~ 3388573 (+)
G679324 NA other upstream 654189 2388867 ~ 2397360 (+)
G679076 NA other upstream 1252116 1795170 ~ 1799433 (+)
G678946 NA other upstream 1495398 1518353 ~ 1612547 (+)
G678637 NA other upstream 1895877 1149551 ~ 1155672 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 501252 3569165 ~ 3573135 (+)
G680736 NA other downstream 713666 3765691 ~ 3784441 (+)
G681137 NA other downstream 1731280 4783305 ~ 4785631 (+)
G681268 NA other downstream 2318385 5370410 ~ 5373762 (+)
G681592 NA other downstream 3421010 6471995 ~ 6478999 (+)

Expression


Co-expression Network