G680441


Basic Information

Item Value
gene id G680441
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3213013 ~ 3280015 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU801301
ATTTTTGTTTGTTTTTGCGTACAAAAAGTATTCTCGTCACTTCATAACATTAAGGTTGAACCAATGTAGTCACGTTGACTATTTTAACGATGTCTTTACTACTCTTCTGGACCTTGAATGATGGTAATTACGTTGCTTTCTATAGGAGATAAAAAAAAAACTCGGATTTCATCAAAAATATCTTAATTTGTGTTCTGAAGATGAAGGAAGGTCTTACGGGTGTGGAACGACATGAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU801301 True 238 lncRNA 0.34 2 3213013 3280015

Neighbor

gene id symbol gene type direction distance location
CI01180000_03149731_03154047 NA coding upstream 58925 3149047 ~ 3154088 (+)
CI01180000_03077007_03078238 NA coding upstream 134214 3076607 ~ 3078799 (+)
CI01180000_02998131_03010201 NA coding upstream 202510 2998131 ~ 3010503 (+)
CI01180000_02951792_02968343 STK32C coding upstream 244670 2951792 ~ 2968343 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 coding upstream 520830 2689271 ~ 2693221 (+)
CI01180000_03280581_03284614 NA coding downstream 333 3280348 ~ 3284621 (+)
CI01180000_03286578_03289266 NA coding downstream 6048 3286063 ~ 3289303 (+)
CI01180000_03425920_03442839 SUFU.L, SUFU coding downstream 145499 3425514 ~ 3444183 (+)
CI01180000_03447461_03475999 TRIM8A coding downstream 167329 3447344 ~ 3476102 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 coding downstream 289150 3569165 ~ 3573135 (+)
G680317 NA non-coding upstream 33447 3123791 ~ 3179566 (+)
G680424 NA non-coding upstream 43557 3165488 ~ 3169456 (+)
G680331 NA non-coding upstream 160988 3051549 ~ 3052025 (+)
G680349 NA non-coding upstream 245256 2966958 ~ 2967757 (+)
G680309 NA non-coding upstream 308849 2903841 ~ 2904164 (+)
G680705 NA non-coding downstream 107212 3387227 ~ 3387686 (+)
G680706 NA non-coding downstream 108273 3388288 ~ 3388573 (+)
G680767 NA non-coding downstream 169070 3449085 ~ 3460969 (+)
G680797 NA non-coding downstream 222094 3502109 ~ 3502348 (+)
G680743 NA non-coding downstream 237610 3517625 ~ 3524426 (+)
G679324 NA other upstream 815653 2388867 ~ 2397360 (+)
G679076 NA other upstream 1413580 1795170 ~ 1799433 (+)
G678946 NA other upstream 1656862 1518353 ~ 1612547 (+)
G678637 NA other upstream 2057341 1149551 ~ 1155672 (+)
G680736 NA other downstream 485676 3765691 ~ 3784441 (+)
G681137 NA other downstream 1503290 4783305 ~ 4785631 (+)
G681268 NA other downstream 2090395 5370410 ~ 5373762 (+)
G681592 NA other downstream 3193020 6471995 ~ 6478999 (+)

Expression


Co-expression Network