G682806


Basic Information

Item Value
gene id G682806
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3977096 ~ 3979869 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU803943
TTTAGTAGTAATGATTTTATTCAGTTAAGAAATCAGCACATTGAACATATTTACCTCTGTACATACAATGGTCTATTGCACTTGTTATGAAAAAAGGAAAAACACTATCACCACAGGCCTAACATGGGTAACAGCTTATGCATTTAGGATATTTACATTTTGTTTGTCTACTTAAGTTAGAGCCTTGCTTTATAGGCCAGTTCACATTACACAGCACAATCTGAGGTTCGGATGTATTCACAGGAATATCTGAGGCATTTCCACTATATCATCCCTCAAAATGTGTTGTTAATCAGACATCATAAAATTTGGTCACTCTCAATGGAATAATTAGGCATAGGGATGTTCACACTTTCTCTGCTGGCTGAAAGAACACTTTACCACCCGGTCAGCGGTTACCTGTATTGTTTGCTCTTAAAATGTTAAATAAAACTACTTAAAAAGTCTGATTGGCAATATTCAGCAGTATATTCACCTCAAAGAAAGAACACAGGATGCGTATCGCTCCTCTGAACTCATGTAAACCGATTTCAAGAGCACACTGTATACTGTAGCTTAAGATCACTGCTCATTTGTTAGTGTCAGTGACGCGTAAGTGCATTTAATTCATGTTAAAAGTCCAACTGGCATTCAGCAGCAGCTATCCAATGTTTACTTGATGTGAAAATGAAAATGTACAAAACCAAAAAAGAAAAAACACTTTCAGTCATTCGAGAGCTATAGCCATATGAACCAGGGCAAACATTAATGTTCACACAGTATAGCGATGGCTGTGATGTGTTTGTGAGTGCTGTACAGTAGTTTGCAACAAATCCAGTGGTTTCATCCAAGGTTAAAAAAAATAATAATAATAATAATAATAATTCACACAGATGGCTCCAGGTAGCGGAAATGTATTAATACATTGAAGTGTTTGAGTTAATGCTCATCTTTGTCTCTTTGACCTTTCTTCTCTTTCTCATCCTGTAATGCCGTGCCAAGTTTCTTAATGAGAACAGACAGAACCTTATCCAGAGGGTCCATCACTCCTCTCTGCAGCCACTTGGGAATCGTAGTCCTGGCATGGTGGAATCCCAACTTCTGCAAAATGTAGTCCACTCCCACTGGATCGATCTTACGGCCCGTCCACGAGATCAACCTGAAACATGCCACGTGTCAAATGACTTCATTACAGACATTAAATGTGTGCTAATGATGGTGAAATACGTACTTGTATGGAGTAAGCAAGTATACCACATATAACCACCTGCCGATGTCCTAACAATAACCCAGAAAACCCTAGCAACTGCCTAGCATTCTTTCAGGAACACTCTTGCAACTTTCACAATGACTCAGCAACAACTAGGTTGCTAGCACCTACTCCTAACAACCCCCTAAAAACACCATTGCAACCATCTAGAAAACCCTGGCTATCACCTAGCAAACACCCACAACACCTTAGCAATGTCCTAGCATCTAGCAAAAAAACCTTAGCAACCATCTGGCAACTATTTAAAACTTGTATCAACCAGCCAGAACATACTAGCAGCTCCCTAATGTCCAGTCAGAAAACCTTAACTACCACCTAGCAACACCCAAGCAACCACCCAGATCCCCACAGCAACCAGCCAGAACACCCTAGCAACTCCCTACCATCCAGTCAGAAAACCTTAACTATCACCTAGCAACACCCAAGCAGCCACCCAGAACCCCATAGCAACCAGCCAGAACACCCTAGCAACTCCCTACCGTCCAGTCAGAAAATGTAACTACCATCTAGCAACACCCGGGCAACCACCCAGAACCCCACAGCAACTAGCCAGAACACCCTAGCAACTCCCTACCGTCCAGACAGAAAACCTTAACTACCACCTAACAACACCTGAGCAACCAGCCAGAACAGCCTAGCAACTCCCTACCTTCCAGTCAGAAAACCTTAACTACCACCTAACAACACCCAAGCAACCACCCAGAACACCCTAGCAACTCCCTACCATCCAGTCAGAAAATGTAACTACCATCTAGCAACACCCAAGCAACTCCCCACCATCCAGTCAAAAAATGTATCTACCACCTAGCAACACCCTAGCAACTCCCTACCATCCAGTCAGAAAATGTAACTACCACCTAGCAACACCCTAGCAACTCTCTACCATCCATTCAGAAAATCTCAACTACCACCTAGCAGCCACCCGAGCAACCACCCAGAACCCCAGTCTGGAACACCCTAGTAACTCCCTACCACCCAGTCAGAACACCTTAACAACTGCCTAGCAACACCCTAACAACCACAACAACTGTCTATTAACACATGTCTATTTGATTTGAGACATCAGATAGGTCTGTGTGGAACATGAGTTGAGGTCATGTGACTACAGTGTTACCGTAGTGTGGGCTCCAGATGCCATGTGTTGCAGAGGAACTCTCTCCAGTCCACTGTAGTATAGTTTACTCCCTCTTCCTTCTTCTCTGATGAGGCTTCATCCTGCTGCGCGGTGGGGCTCTTCTGACCAGATCGAGACGCCAAGATGCGCGGCGCGAAGAGGGCTGCAACACAAG
>TU803942
TTTAGTAGTAATGATTTTATTCAGTTAAGAAATCAGCACATTGAACATATTTACCTCTGTACATACAATGGTCTATTGCACTTGTTATGAAAAAAGGAAAAACACTATCACCACAGGCCTAACATGGGTAACAGCTTATGCATTTAGGATATTTACATTTTGTTTGTCTACTTAAGTTAGAGCCTTGCTTTATAGGCCAGTTCACATTACACAGCACAATCTGAGGTTCGGATGTATTCACAGGAATATCTGAGGCATTTCCACTATATCATCCCTCAAAATGTGTTGTTAATCAGACATCATAAAATTTGGTCACTCTCAATGGAATAATTAGGCATAGGGATGTTCACACTTTCTCTGCTGGCTGAAAGAACACTTTACCACCCGGTCAGCGGTTACCTGTATTGTTTGCTCTTAAAATGTTAAATAAAACTACTTAAAAAGTCTGATTGGCAATATTCAGCAGTATATTCACCTCAAAGAAAGAACACAGGATGCGTATCGCTCCTCTGAACTCATGTAAACCGATTTCAAGAGCACACTGTATACTGTAGCTTAAGATCACTGCTCATTTGTTAGTGTCAGTGACGCGTAAGTGCATTTAATTCATGTTAAAAGTCCAACTGGCATTCAGCAGCAGCTATCCAATGTTTACTTGATGTGAAAATGAAAATGTACAAAACCAAAAAAGAAAAAACACTTTCAGTCATTCGAGAGCTATAGCCATATGAACCAGGGCAAACATTAATGTTCACACAGTATAGCGATGGCTGTGATGTGTTTGTGAGTGCTGTACAGTAGTTTGCAACAAATCCAGTGGTTTCATCCAAGGTTAAAAAAAATAATAATAATAATAATAATAATTCACACAGATGGCTCCAGGTAGCGGAAATGTATTAATACATTGAAGTGTTTGAGTTAATGCTCATCTTTGTCTCTTTGACCTTTCTTCTCTTTCTCATCCTGTAATGCCGTGCCAAGTTTCTTAATGAGAACAGACAGAACCTTATCCAGAGGGTCCATCACTCCTCTCTGCAGCCACTTGGGAATCGTAGTCCTGGCATGGTGGAATCCCAACTTCTGCAAAATGTAGTCCACTCCCACTGGATCGATCTTACGGCCCGTCCACGAGATCAACCTGAAACATGCCACGTGTCAAATGACTTCATTACAGACATTAAATGTGTGCTAATGATGGTGAAATACGTACTTGTATGGAGTAAGCAAGTATACCACATATAACCACCTGCCGATGTCCTAACAATAACCCAGAAAACCCTAGCAACTGCCTAGCATTCTTTCAGGAACACTCTTGCAACTTTCACAATGACTCAGCAACAACTAGGTTGCTAGCACCTACTCCTAACAACCCCCTAAAAACACCATTGCAACCATCTAGAAAACCCTGGCTATCACCTAGCAAACACCCACAACACCTTAGCAATGTCCTAGCATCTAGCAAAAAAACCTTAGCAACCATCTGGCAACTATTTAAAACTTGTATCAACCAGCCAGAACATACTAGCAGCTCCCTAATGTCCAGTCAGAAAACCTTAACTACCACCTAGCAACACCCAAGCAACCACCCAGATCCCCACAGCAACCAGCCAGAACACCCTAGCGACTCCCTACCGTCCAGACAGAAAACCTTAACTACCACCTAACAACACCTGAGCAACCAGCCAGAACAGCCTAGCAACTCCCTACCTTCCAGTCAGAAAACCTTAACTACCACCTAACAACACCCAAGCAACCACCCAGAACACCCTAGCAACTCCCTACCATCCAGTCAGAAAATGTAACTACCATCTAGCAACACCCAAGCAACTCCCCACCATCCAGTCAAAAAATGTATCTACCACCTAGCAACACCCTAGCAACTCCCTACCATCCAGTCAGAAAATGTAACTACC
>TU803940
TTTAGTAGTAATGATTTTATTCAGTTAAGAAATCAGCACATTGAACATATTTACCTCTGTACATACAATGGTCTATTGCACTTGTTATGAAAAAAGGAAAAACACTATCACCACAGGCCTAACATGGGTAACAGCTTATGCATTTAGGATATTTACATTTTGTTTGTCTACTTAAGTTAGAGCCTTGCTTTATAGGCCAGTTCACATTACACAGCACAATCTGAGGTTCGGATGTATTCACAGGAATATCTGAGGCATTTCCACTATATCATCCCTCAAAATGTGTTGTTAATCAGACATCATAAAATTTGGTCACTCTCAATGGAATAATTAGGCATAGGGATGTTCACACTTTCTCTGCTGGCTGAAAGAACACTTTACCACCCGGTCAGCGGTTACCTGTATTGTTTGCTCTTAAAATGTTAAATAAAACTACTTAAAAAGTCTGATTGGCAATATTCAGCAGTATATTCACCTCAAAGAAAGAACACAGGATGCGTATCGCTCCTCTGAACTCATGTAAACCGATTTCAAGAGCACACTGTATACTGTAGCTTAAGATCACTGCTCATTTGTTAGTGTCAGTGACGCGTAAGTGCATTTAATTCATGTTAAAAGTCCAACTGGCATTCAGCAGCAGCTATCCAATGTTTACTTGATGTGAAAATGAAAATGTACAAAACCAAAAAAGAAAAAACACTTTCAGTCATTCGAGAGCTATAGCCATATGAACCAGGGCAAACATTAATGTTCACACAGTATAGCGATGGCTGTGATGTGTTTGTGAGTGCTGTACAGTAGTTTGCAACAAATCCAGTGGTTTCATCCAAGGTTAAAAAAAATAATAATAATAATAATAATAATTCACACAGATGGCTCCAGGTAGCGGAAATGTATTAATACATTGAAGTGTTTGAGTTAATGCTCATCTTTGTCTCTTTGACCTTTCTTCTCTTTCTCATCCTGTAATGCCGTGCCAAGTTTCTTAATGAGAACAGACAGAACCTTATCCAGAGGGTCCATCACTCCTCTCTGCAGCCACTTGGGAATCGTAGTCCTGGCATGGTGGAATCCCAACTTCTGCAAAATGTAGTCCACTCCCACTGGATCGATCTTACGGCCCGTCCACGAGATCAACCTGAAACATGCCACGTGTCAAATGACTTCATTACAGACATTAAATGTGTGCTAATGATGGTGAAATACGTACTTGTATGGAGTAAGCAAGTATACCACATATAACCACCTGCCGATGTCCTAACAATAACCCAGAAAACCCTAGCAACTGCCTAGCATTCTTTCAGGAACACTCTTGCAACTTTCACAATGACTCAGCAACAACTAGGTTGCTAGCACCTACTCCTAACAACCCCCTAAAAACACCATTGCAACCATCTAGAAAACCCTGGCTATCACCTAGCAAACACCCACAACACCTTAGCAATGTCCTAGCATCTAGCAAAAAAACCTTAGCAACCATCTGGCAACTATTTAAAACTTGTATCAACCAGCCAGAACATACTAGCAGCTCCCTAATGTCCAGTCAGAAAACCTTAACTACCACCTAGCAACACCCAAGCAACCACCCAGATCCCCACAGCAACCAGCCAGAACACCCTAGCAACTCCCTACCATCCAGTCAGAAAACCTTAACTATCACCTAGCAACACCCAAGCAGCCACCCAGAACCCCATAGCAACCAGCCAGAACACCCTAGCAACTCTCTACAGTCCAGTCAGAAAACCTTAGCTCCCACCTAGCATCACCTGGGCGACCAGCCAGAACACCCTAGCAACTCCCTACCGTCCAGTCAGAAAATGTAACTACCATCTAGCAACACCCGGGCAACCACCCAGAACCCCACAGCAACTAGCCAGAACACCCTAGCAACTCCCTACCGTCCAGACAGAAAACCTTAACTACCACCTAACAACACCTGAGCAACCAGCCAGAACAGCCTAGCAACTCCCTACCTTCCAGTCAGAAAACCTTAACTACCACCTAACAACACCCAAGCAACCACCCAGAACACCCTAGCAACTCCCTACCATCCAGTCAGAAAATGTAACTACCATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU803943 False 2538 lncRNA 0.44 3 3977096 3979869
TU803942 False 1913 lncRNA 0.41 2 3977530 3979869
TU803940 True 2077 lncRNA 0.42 2 3977632 3979869

Neighbor

gene id symbol gene type direction distance location
CI01180000_03824786_03831186 ADH8A coding downstream 145910 3824669 ~ 3831186 (-)
CI01180000_03813694_03819279 NA coding downstream 157779 3813348 ~ 3819317 (-)
CI01180000_03789351_03795877 NA coding downstream 180899 3788671 ~ 3796197 (-)
CI01180000_03766003_03784047 ENPEP coding downstream 192690 3765731 ~ 3784406 (-)
CI01180000_03695198_03697316 COMMD8 coding downstream 279780 3694823 ~ 3697316 (-)
CI01180000_03983803_04002213 WHSC1 coding upstream 3617 3983486 ~ 4002655 (-)
CI01180000_04082957_04114030 FGFR3 coding upstream 102779 4082648 ~ 4114030 (-)
CI01180000_04131891_04133055 NA coding upstream 151089 4130958 ~ 4133136 (-)
CI01180000_04327538_04335433 NA coding upstream 347491 4327360 ~ 4336389 (-)
CI01180000_04554549_04560819 NA coding upstream 573572 4553441 ~ 4561772 (-)
G682807 NA non-coding downstream 29447 3940686 ~ 3947649 (-)
G682827 NA non-coding downstream 60605 3907576 ~ 3916491 (-)
G682802 NA non-coding downstream 97226 3879663 ~ 3879870 (-)
G682801 NA non-coding downstream 97642 3879242 ~ 3879454 (-)
G682800 NA non-coding downstream 98356 3878482 ~ 3878740 (-)
G682848 NA non-coding upstream 23358 4003227 ~ 4011512 (-)
G682863 NA non-coding upstream 57878 4037747 ~ 4039930 (-)
G682865 NA non-coding upstream 62459 4042328 ~ 4042659 (-)
G682868 NA non-coding upstream 65018 4044887 ~ 4045256 (-)
G682870 NA non-coding upstream 66635 4046504 ~ 4046774 (-)
CI01180000_03242704_03242928 YPEL5 other downstream 732139 3241341 ~ 3242929 (-)
CI01180000_03016426_03018342 NA other downstream 957421 3014433 ~ 3018343 (-)
CI01180000_02988807_02995955 NA other downstream 983232 2987081 ~ 2997401 (-)
G680506 NA other downstream 1125180 2771047 ~ 2851916 (-)
G680525 NA other downstream 1360340 2616354 ~ 2616756 (-)
CI01180000_04796238_04797552 NA other upstream 816391 4796176 ~ 4797842 (-)
G683394 NA other upstream 1638338 5618207 ~ 5619271 (-)
G683294 NA other upstream 1771175 5751044 ~ 5755526 (-)
G683673 NA other upstream 2782206 6762075 ~ 6762844 (-)
G684018 NA other upstream 3423278 7403147 ~ 7413132 (-)

Expression


Co-expression Network