G681683


Basic Information

Item Value
gene id G681683
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 6630330 ~ 6630546 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU802660
AAATATGCTAATTAGCCCTGCCTCCACTCACTCGCACGAGCTCAAGAGATCCACTCGGTGAACTTACTGAGGTAAACGCTTCACAATGGTATCGCTTTTTACAACGTCGGACACATAACGGTAATTAATATGATTAGGATTTTGCTTGACTACATTATCAATCAGCTAATAATGTGTTGCTAATGTTACACAAACCATGTTCCCGATCGCGAGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU802660 True 217 lncRNA 0.41 1 6630330 6630546

Neighbor

gene id symbol gene type direction distance location
CI01180000_06608734_06626459 IKAROS, IKZF1 coding upstream 3518 6608734 ~ 6626812 (+)
CI01180000_06581704_06589445 NA coding upstream 40849 6580990 ~ 6589481 (+)
CI01180000_06532667_06556697 VWC2 coding upstream 72826 6532276 ~ 6557504 (+)
CI01180000_06503211_06517041 NA coding upstream 113228 6503211 ~ 6517102 (+)
CI01180000_06369051_06375352 NA coding upstream 253077 6368381 ~ 6377253 (+)
CI01180000_06638215_06643427 TTL coding downstream 7263 6637809 ~ 6643820 (+)
CI01180000_06704767_06711402 BAG5 coding downstream 74221 6704767 ~ 6712156 (+)
CI01180000_06714748_06715005 NA coding downstream 84059 6714605 ~ 6715107 (+)
CI01180000_06755090_06760583 NA coding downstream 124544 6755090 ~ 6760583 (+)
CI01180000_06762114_06762590 NA coding downstream 131568 6762114 ~ 6762772 (+)
G681682 NA non-coding upstream 267 6629825 ~ 6630063 (+)
G681592 NA non-coding upstream 151331 6471995 ~ 6478999 (+)
G681591 NA non-coding upstream 163106 6442303 ~ 6467224 (+)
G681606 NA non-coding upstream 226398 6397518 ~ 6403932 (+)
G681540 NA non-coding upstream 246517 6270150 ~ 6383813 (+)
G681685 NA non-coding downstream 1107 6631653 ~ 6631929 (+)
G681674 NA non-coding downstream 14562 6645108 ~ 6645323 (+)
G681652 NA non-coding downstream 14896 6645442 ~ 6646838 (+)
G681706 NA non-coding downstream 105307 6735853 ~ 6736093 (+)
G681708 NA non-coding downstream 107053 6737599 ~ 6737901 (+)
G681268 NA other upstream 1256568 5370410 ~ 5373762 (+)
G681137 NA other upstream 1844699 4783305 ~ 4785631 (+)
G680736 NA other upstream 2845889 3765691 ~ 3784441 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other upstream 3057933 3569165 ~ 3573135 (+)
G681686 NA other downstream 2362 6632908 ~ 6634989 (+)
G681667 NA other downstream 25300 6655846 ~ 6659546 (+)
CI01180000_07403482_07412752 HELLS other downstream 772601 7403482 ~ 7413190 (+)
CI01180000_07694615_07695428 MRPL14 other downstream 1032877 7694529 ~ 7695667 (+)
G682232 NA other downstream 1737639 8368185 ~ 8368935 (+)

Expression


Co-expression Network