Gene
RNA
| Item | Value |
|---|---|
| gene id | G683960 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 7290800 ~ 7292713 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU805232 | True | 1889 | lncRNA | 0.35 | 2 | 7290800 | 7292713 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_07244068_07250348 | NA | coding | downstream | 39891 | 7244019 ~ 7250909 (-) |
| CI01180000_07146950_07151404 | H2AFY2 | coding | downstream | 137705 | 7146451 ~ 7153095 (-) |
| CI01180000_07045235_07052218 | PITX3, PITX3.S, PITX1 | coding | downstream | 238480 | 7044465 ~ 7052320 (-) |
| CI01180000_06984285_06989850 | AIFM2 | coding | downstream | 300129 | 6983493 ~ 6990671 (-) |
| CI01180000_06956161_06961385 | NA | coding | downstream | 329415 | 6956161 ~ 6961385 (-) |
| CI01180000_07365562_07368471 | NA | coding | upstream | 72737 | 7365450 ~ 7368471 (-) |
| CI01180000_07379273_07380075 | NA | coding | upstream | 86490 | 7379203 ~ 7380075 (-) |
| CI01180000_07414269_07416328 | NA | coding | upstream | 121055 | 7413768 ~ 7416328 (-) |
| CI01180000_07417697_07426881 | ATL2 | coding | upstream | 124811 | 7417524 ~ 7426881 (-) |
| CI01180000_07491283_07505536 | KMO | coding | upstream | 198570 | 7491283 ~ 7505536 (-) |
| G683959 | NA | non-coding | downstream | 82 | 7286938 ~ 7290718 (-) |
| G683979 | NA | non-coding | downstream | 96317 | 7194254 ~ 7194483 (-) |
| G683963 | NA | non-coding | downstream | 118551 | 7172034 ~ 7172249 (-) |
| G683893 | NA | non-coding | downstream | 294007 | 6994830 ~ 6996793 (-) |
| G683890 | NA | non-coding | downstream | 307763 | 6982770 ~ 6983037 (-) |
| G684020 | NA | non-coding | upstream | 36041 | 7328754 ~ 7333149 (-) |
| G684049 | NA | non-coding | upstream | 56246 | 7348959 ~ 7349240 (-) |
| G684054 | NA | non-coding | upstream | 87988 | 7380701 ~ 7385464 (-) |
| G684079 | NA | non-coding | upstream | 238776 | 7531489 ~ 7532527 (-) |
| G684128 | NA | non-coding | upstream | 335163 | 7627876 ~ 7628101 (-) |
| G683673 | NA | other | downstream | 527956 | 6762075 ~ 6762844 (-) |
| G683294 | NA | other | downstream | 1535274 | 5751044 ~ 5755526 (-) |
| G683394 | NA | other | downstream | 1671529 | 5618207 ~ 5619271 (-) |
| CI01180000_04796238_04797552 | NA | other | downstream | 2492958 | 4796176 ~ 4797842 (-) |
| CI01180000_03242704_03242928 | YPEL5 | other | downstream | 4045843 | 3241341 ~ 3242929 (-) |
| G684018 | NA | other | upstream | 110434 | 7403147 ~ 7413132 (-) |
| G684071 | NA | other | upstream | 214177 | 7506890 ~ 7525654 (-) |
| G684080 | NA | other | upstream | 286691 | 7579404 ~ 7582803 (-) |
| G684182 | NA | other | upstream | 618048 | 7910761 ~ 7911208 (-) |
| G684493 | NA | other | upstream | 1429980 | 8722693 ~ 8723867 (-) |
