XLOC_015432


Basic Information

Item Value
gene id XLOC_015432
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 23936535 ~ 23940330 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033538
TTTTTCTTTAATGTATTTGTaggttgtttatttgattttactcCTGCTGCAGAATCTACTCAATCAATCTATCATTGTAAAGTCTCTCCAAACAGAGATAGTAAGTCATCTGGCGAAATTGTTTTGATATACTGTACCAattgcagaataaaaaataatatcggCGTGTTAGATtctttcaatatcgtgcagccatattttaaaataatttattaccaAACCAAACAAAATAGGACTTCTTGAGAACAAAtatggaaatactgtgaaaaatgttctTTATGTGTGACTAAATTCTAAAACTGTTAAAAGACCCAAAACAGTAATTAACTCATACAGGAACAGGTCCTGTACATCCGGCTTGGTAAGTTATTCTCCACAACATCAacctttttttctaaatctaaaaGAAAGACAAGTCATacttataaaacaaaaatttattcAGTGAGCACCATTCAAATTTGAAAAAAGGAGAAAACGAGGGTATCTCTCTATTGCTGTATCATACTCCTATTTGACTTCTAGAAGATACAAATAACATAACTTACTTTCTAGTTTGCCTTTCTAAATGTGAGAGATTAAACACAGTGATGAGTTATAAATGATTGTGGCCATTGTCTACTTTCTAAATCAGTATCTATTATGCACTTGGGTTTTAGTTATGTGCATTAACATCATAAATTAGACGCATCGCCTCCCTTAAATACTAGTTTAAATGCAAGTTCACAGAATAGAGCTTCATGGGTGTCAAAACAAActataaccaaaaataaaataacaacaccCAAGAAATTATTAATACAGTGCATTTAAACATCTCCCTCGTTTGTTTGAATATACCCAAATACtgatatctaaatatatttaatctGATTAAAAGTAAGTGTCTTGTATCTATCAGTGTGTGCGGTTATAACAATGTAGTtaatacaagcacacacacaaagctaTATTAGTGATCGTAATGAGGGCTAAAACCTTTTTAGAAGGCAAAAAAATAATGTGGTGAATTCATAAAGTGGATCTACACTTGCTCATAGATGTCTGACTGAGGTATTCTTTGGTTTTCTAATAGTTGAATGAAAGTCGGTGGGTCTTCAATTGAACAATACCAGTGGGTgatttatacatatttacatcATGCTCAGACAAGAAGTGAAAGACCAATCCTGATCTGTCAAGACATTTCGTCCATCAAAGGAGTAAATCGGAGTAAGTGGATCAAAAACGCCTCCATTACCAGAGAACATG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033538 True 1251 lncRNA 0.32 2 23936535 23940330

Neighbor

gene id symbol gene type direction distance location
XLOC_015431 si:dkey-24c2.9 coding upstream 99112 23823622 ~ 23837423 (+)
XLOC_015430 gorasp1a coding upstream 116255 23808640 ~ 23820280 (+)
XLOC_015429 csrnp1a coding upstream 131396 23790748 ~ 23805139 (+)
XLOC_015428 NA coding upstream 157106 23772918 ~ 23779429 (+)
XLOC_015427 slc22a13a coding upstream 191245 23731194 ~ 23745290 (+)
XLOC_015433 CR788285.2 coding downstream 72920 24013250 ~ 24014943 (+)
XLOC_015434 NA coding downstream 82468 24022798 ~ 24024448 (+)
XLOC_015435 kcnh2a coding downstream 140364 24080694 ~ 24168670 (+)
XLOC_015436 map4l coding downstream 236676 24177006 ~ 24252506 (+)
XLOC_015437 BX000358.1 coding downstream 320887 24261217 ~ 24261296 (+)
XLOC_015426 BX649335.1 non-coding upstream 256546 23679873 ~ 23679989 (+)
XLOC_015422 NA non-coding upstream 327259 23541727 ~ 23609276 (+)
XLOC_015423 NA non-coding upstream 379020 23550186 ~ 23557515 (+)
XLOC_015420 NA non-coding upstream 485134 23450772 ~ 23451401 (+)
XLOC_015440 CR384062.1 non-coding downstream 408259 24348589 ~ 24351040 (+)
XLOC_015443 NA non-coding downstream 543943 24484273 ~ 24497841 (+)

Expression


Co-expression Network