XLOC_015488 (BX649522.3)


Basic Information

Item Value
gene id XLOC_015488
gene name BX649522.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 27218149 ~ 27242711 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030979
GATTTACCACACACTTCCACCTACGATGTAGAAGGTGGCATAGGAAGCTGTCAGAAGAGCAAAGCCTTTCTTAAGAAAGCATTACAATAAAGGAAGGGATATGAAAGACTCCTAGACTGAGAAAGGGGGTCATGGGCGCTGCCATGTTAATGGAGGGAGCTgatggatttacaacatgttacAAGATCAACTTCTAAACTACATGACAAATCAGCAATGCTGTAGTGGAGACACTCAATCAGCGACAACACCAATCATGTATCCACACAGTTTGTTCATCATTCATTACGCCATGTGGCTCATCCAGCTCGCTGTCGTAAATGACTAATCACGGGTAGATGGATGAGGAAAGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117708

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030979 True 353 lncRNA 0.44 3 27218149 27242711

Neighbor

gene id symbol gene type direction distance location
XLOC_015487 cdh7a coding upstream 123496 27010439 ~ 27094653 (+)
XLOC_015486 BX511023.1 coding upstream 207804 27000542 ~ 27010345 (+)
XLOC_015485 NA coding upstream 475943 26721068 ~ 26742206 (+)
XLOC_015484 impa1 coding upstream 529241 26682913 ~ 26688908 (+)
XLOC_015482 asph coding upstream 535967 26655744 ~ 26682182 (+)
XLOC_015489 BX649522.1 coding downstream 78303 27321014 ~ 27324181 (+)
XLOC_015490 tesk2 coding downstream 87750 27330461 ~ 27380161 (+)
XLOC_015491 si:ch73-382f3.1 coding downstream 143906 27386617 ~ 27391558 (+)
XLOC_015492 selenop2 coding downstream 152087 27394798 ~ 27401105 (+)
XLOC_015493 elovl8a coding downstream 160589 27403300 ~ 27409706 (+)
XLOC_015483 BX248497.1 non-coding upstream 545302 26667680 ~ 26672847 (+)
XLOC_015479 NA non-coding upstream 622731 26592695 ~ 26595418 (+)
XLOC_015478 NA non-coding upstream 698600 26513608 ~ 26519549 (+)
XLOC_015500 CR925777.1 non-coding downstream 732843 27975554 ~ 28038625 (+)
XLOC_015501 NA non-coding downstream 951427 28194138 ~ 28194608 (+)
XLOC_015502 NA non-coding downstream 1002749 28245460 ~ 28350447 (+)
XLOC_015503 NA non-coding downstream 1151232 28393943 ~ 28423487 (+)

Expression


Co-expression Network