XLOC_015546 (CT955962.2)


Basic Information

Item Value
gene id XLOC_015546
gene name CT955962.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 31101088 ~ 31101573 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031078
CGCGCCTAGCACGAGGGAGAGAGCGATCGCTTGTACAGAGAAATGCACGGAGCTAAAGTTACATTTAAGGACTGATTTAAGAGAGATTTAATGCatatttgagtttgttttttgttccgTTCATCTTCATTGTTTGAACACCTGGTTGGAAGGGAGAACAAGCTCTTACGGTGTTGTACAGTCTTTAAGGACGGCAAATGCAACAATAAAGGCACAAAGGAGGACAGTGCAACATCAGTGCATGAGTTTAATCCTTTTATTTTTCCAACCGGGCTGTTACA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116355

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031078 True 281 processed_transcript 0.42 2 31101088 31101573

Neighbor

gene id symbol gene type direction distance location
XLOC_015544 NA coding upstream 17008 31075576 ~ 31084080 (+)
XLOC_015543 lpin2 coding upstream 116580 30960351 ~ 30984508 (+)
XLOC_015542 myom1a coding upstream 141175 30916188 ~ 30959913 (+)
XLOC_015541 bag1 coding upstream 192788 30904069 ~ 30908300 (+)
XLOC_015540 chmp5a coding upstream 199968 30894595 ~ 30901120 (+)
XLOC_015547 CT955962.1 coding downstream 6356 31107929 ~ 31108414 (+)
XLOC_015548 clul1 coding downstream 169509 31271082 ~ 31364659 (+)
XLOC_015549 NA coding downstream 190073 31291646 ~ 31292603 (+)
XLOC_015550 colec12 coding downstream 281017 31382590 ~ 31435158 (+)
XLOC_015551 stam coding downstream 335974 31437547 ~ 31452606 (+)
XLOC_015527 NA non-coding upstream 766575 30329405 ~ 30334513 (+)
XLOC_015525 CR788254.3 non-coding upstream 820584 30277334 ~ 30280504 (+)
XLOC_015524 CR788254.1 non-coding upstream 824026 30276217 ~ 30277062 (+)
XLOC_015523 CR788254.2 non-coding upstream 830925 30269306 ~ 30270163 (+)
XLOC_015554 NA non-coding downstream 435765 31537338 ~ 31540590 (+)
XLOC_015559 NA non-coding downstream 682439 31784012 ~ 31786282 (+)
XLOC_015564 NA non-coding downstream 764926 31866499 ~ 31868755 (+)

Expression


Co-expression Network