XLOC_015932


Basic Information

Item Value
gene id XLOC_015932
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 51752457 ~ 51766022 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033689
TCCGCCCCAGCTATCCGATGACCTGCTATGAAAACATGAAActacaatttaattttttaataattgtttttatttgaagCATTTTGAAAACTAAATGAATTAGTGAGATCACCATATACATAATCATTATGTGCCTATACAACCACATAATACTACTGATTAATTCTGTGATATGCACCTCTTAAATGCCACACTTTTCCTTTGTGTTCTGTGGGTTTAGATGATGGGTTGGTTAATTGCAGAGATCCGTCTGACAGCATCTGGCATATAAATGGCGATTGGACTCAAGAGCCGAGCAGTCTTCCATGTTGATGCACCTCCGGAAGTAGGAATCTAGAGGAATGACAAAGAACATCAAAGGAAATTTCTTGTAGGCGACAGCTACACACGCATTTTGATCGTTGACACAGGTCTCTTCAGTGAACCCGCAGTTTCCTCCAGCGGTCCGTCTGACAGCATCTGGCCGATATATGGGGACTGGACTGAAGAATTATGCAGTCTGCCATGCTGATGCACCTTCGGAAGTAGGAATCTAGAGGAATGACAAAAAACATCAAAGTGAAAatggtgttctgactggttgttaagggatacagctgtggctggaagttcacaagaattattcatattatatattaaattaccaatttattgtattttattaacacctaCGCCCACCCagaccctaaacccagccatcacagtaatgtaaaaacagtaattataccaagtattattcaaattatttaattaattgtatttaattaccaTCTACTGCAACCTGCACAGTACTGTAAATATTATTGTTGTACATTGTCACataaattgttatattaatgTAGTGATCTGctgctgtatcctatctagactttactcTGCTGCAGTATTCAATATCAGACTTGTTTCTGATTTGTTACCACACTAAGGAATtatgttgttgctaaggtgttcctaCGCAGTTGCAAAGGTATTCTAAACATTCTAAATTCTAAAAGTagaagcatttaaaaaataacacattGGTG

Function

GO:

id name namespace
GO:0061303 cornea development in camera-type eye biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033689 True 1025 lncRNA 0.37 3 51752457 51766022

Neighbor

gene id symbol gene type direction distance location
XLOC_015931 abhd4 coding upstream 95350 51645164 ~ 51657107 (+)
XLOC_015929 NA coding upstream 158879 51477657 ~ 51593578 (+)
XLOC_015930 NA coding upstream 182427 51568650 ~ 51570030 (+)
XLOC_015928 NA coding upstream 345331 51398555 ~ 51407126 (+)
XLOC_015927 lrrc24 coding upstream 552535 51183320 ~ 51199922 (+)
XLOC_015933 crygn1 coding downstream 17098 51783120 ~ 51815413 (+)
XLOC_015934 acvr2bb coding downstream 52017 51818039 ~ 51854668 (+)
XLOC_015935 NA coding downstream 175604 51941626 ~ 51949728 (+)
XLOC_015936 yju2 coding downstream 283217 52049239 ~ 52063440 (+)
XLOC_015937 shda coding downstream 299862 52065884 ~ 52093505 (+)
XLOC_015926 BX255896.1 non-coding upstream 673374 51071699 ~ 51079083 (+)
XLOC_015921 NA non-coding upstream 1060111 50691884 ~ 50692346 (+)
XLOC_015938 NA non-coding downstream 336433 52102455 ~ 52102984 (+)
XLOC_015940 NA non-coding downstream 388373 52154395 ~ 52202451 (+)
XLOC_015942 NA non-coding downstream 806300 52572322 ~ 52599189 (+)
XLOC_015946 NA non-coding downstream 1568756 53334778 ~ 53338223 (+)

Expression


Co-expression Network