XLOC_015938


Basic Information

Item Value
gene id XLOC_015938
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 52102455 ~ 52102984 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033692
TGAATAGTCCCcacaaaacaaattataataattcattgttaatttattcaactTCAGATCATCAAGATGTATGTTTTTTCTTCAGTAGGACTTTGAAGAtggtttttagctgaaactgtggccTTTGTTGACTCATAAATTTAAAGCTAGTCGCACTTGATGGAAATCCTGCATTTAGACTGTGATTTTAGTTTTCCATAAATGTCTAAAGTTTCTTAAATCTTGGTAATGAATtatctcttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033692 True 243 lncRNA 0.30 2 52102455 52102984

Neighbor

gene id symbol gene type direction distance location
XLOC_015937 shda coding upstream 8950 52065884 ~ 52093505 (+)
XLOC_015936 yju2 coding upstream 39015 52049239 ~ 52063440 (+)
XLOC_015935 NA coding upstream 152727 51941626 ~ 51949728 (+)
XLOC_015934 acvr2bb coding upstream 247787 51818039 ~ 51854668 (+)
XLOC_015933 crygn1 coding upstream 287042 51783120 ~ 51815413 (+)
XLOC_015939 theg coding downstream 19679 52122663 ~ 52139696 (+)
XLOC_015940 NA coding downstream 51411 52154395 ~ 52202451 (+)
XLOC_015941 plpp2a coding downstream 129646 52232630 ~ 52306803 (+)
XLOC_015942 NA coding downstream 469338 52572322 ~ 52599189 (+)
XLOC_015943 creb3l3b coding downstream 744065 52847049 ~ 52904765 (+)
XLOC_015932 NA non-coding upstream 336433 51752457 ~ 51766022 (+)
XLOC_015929 NA non-coding upstream 508877 51477657 ~ 51593578 (+)
XLOC_015930 NA non-coding upstream 532425 51568650 ~ 51570030 (+)
XLOC_015928 NA non-coding upstream 695329 51398555 ~ 51407126 (+)
XLOC_015946 NA non-coding downstream 1231794 53334778 ~ 53338223 (+)
XLOC_015948 NA non-coding downstream 1340713 53443697 ~ 53461828 (+)
XLOC_015949 NA non-coding downstream 1476265 53579249 ~ 53580772 (+)

Expression


Co-expression Network