XLOC_015939 (theg)


Basic Information

Item Value
gene id XLOC_015939
gene name theg
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 52122663 ~ 52139696 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031612
AACACACCTGACGCTTGAATCAAACGGTGAGTCAAGGAAGAAGCCTCTGTTGACTAATAAAACaactttcaagccaaaataattATAGAGAACTTCCAACTTTCACTTATATGTTTCTAAACTTTTAACGTGCTGGTTTTTGTTTGATCATGGCGTCGAGGATCGATCAGCTCGCGAAGCCCAAAACAAACCTGCTCAAATTCCCGGACAGgCGCTCGGTGTACTGGCTTGATGAGCTACCATCCAGACCAAAAAGCTCCACGACTGCCTTCGAAACAACCCCTCGTTTGGAGAAGCTCGTCCAAAGCAAACGACCAATCCATTTTTATGAGGACAACAGAAGATCAGTGGAGTGGGTTGTTAGTGCAGCTGCGCTGAAGGCTTGTCCCTCTCAGAGGGTGTGTTCACTGGCACTGCCACGGCCACCTGCTGATGGATGGCAGCCTGACCGCCCTCTCATGGACACTTTGAGTGTTGCGGTTAAAACGGCCAAACCGAGTCCAAGGATCTGTTATCTGGCGCAACCGAAGCAAATAAAGATGACATTAACACACTTCAGCGTGGAGTCCAGTGAGCACGAGATTGGCATCAGCACTACCCCCTCCGCCCGCCTGCTGCGGCTGGCCTCTCCTAAGCAGGTGCATCCGCAGCATACACTCGCCCGCTCTGTTTCCTGGCCAATTCCAAAACACGTACTGAAGGCTGGAGCCAGCGAGAGGCTGCAGGTTCTGGCACGTCCTAAAACCCGTCAGGCCCTGTTTGAAGGCTACAATCCATACCGGGTCAGTCCTGCCGCCGGCTCCGCCACCGCCTCCCCCAGACTACTGGAGCTGTCATTACCCCTGCCGCGCAAATGCAGAGAACAGTAAACCAGCATTTCAGCCAGCCATCACTACTGAGGCTTTTGGGAACATTTTTATCATATGcactgagataaaaaaaaattctgctgaatgtacaaaatgataaattattaggcaaggcaagcttacttctatagcacatttcatacacgatGGTAATCCAActtgctttacataaacaagaataaaagaaacattaaatacaat
>TCONS_00031613
TAAAACaactttcaagccaaaataattATAGAGAACTTCCAACTTTCACTTATATGTTTCTAAACTTTTAACGTGCTGGTTTTTGTTTGATCATGGCGTCGAGGATCGATCAGCTCGCGAAGCCCAAAACAAACCTGCTCAAATTCCCGGACAGgCGCTCGGTGTACTGGCTTGATGAGCTACCATCCAGACCAAAAAGCTCCACGACTGCCTTCGAAACAACCCCTCGTTTGGAGAAGCTCGTCCAAAGCAAACGACCAATCCATTTTTATGAGGACAACAGTGAGTCTGATATACGTGTCCTTGCAGAAGATCAGTGGAGTGGGTTGTTAGTGCAGCTGCGCTGAAGGCTTGTCCCTCTCAGAGGGTGTGTTCACTGGCACTGCCACGGCCACCTGCTGATGGATGGCAGCCTGACCGCCCTCTCATGGACACTTTGAGTGTTGCGGTTAAAACGGCCAAACCGAGTCCAAGGATCTGTTATCTGGCGCAACCGAAGCAAATAAAGATGACATTAACACACTTCAGCGTGGAGTCCAGTGAGCACGAGATTGGCATCAGCACTACCCCCTCCGCCCGCCTGCTGCGGCTGGCCTCTCCTAAGCAGGTGCATCCGCAGCATACACTCGCCCGCTCTGTTTCCTGGCCAATTCCAAAACACGTACTGAAGGCTGGAGCCAGCGAGAGGCTGCAGGTTCTGGCACGTCCTAAAACCCGTCAGGCCCTGTTTGAAGGCTACAATCCATACCGGGTCAGTCCTGCCGCCGGCTCCGCCACCGCCTCCCCCAGACTACTGGAGCTGTCATTACCCCTGCCGCGCAAATGCAGAGAACAGTAAACCAGCATTTCAGCCAGCCATCACTACTGAGGCTTTTGGGAACATTTTTATCATATGcactgagataaaaaaaaattctgctgaatgtacaaaatgataaattattaggcaaggcaagcttacttctatagcacatttcatacacgatGGTAATCCAActtgctttacataaacaagaataaaagaaacattaaatacaatgtaagaa

Function

symbol description
theg Predicted to be involved in spermatogenesis. Orthologous to several human genes including THEG (theg spermatid protein).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-59 Predicted to be involved in spermatogenesis. Orthologous to several human genes including THEG (theg spermatid protein).

Ensembl:

ensembl_id ENSDARG00000078644

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031612 False 1070 mRNA 0.49 6 52122663 52139689
TCONS_00031613 True 1046 nonsense_mediated_decay 0.49 6 52122720 52139696

Neighbor

gene id symbol gene type direction distance location
XLOC_015938 NA coding upstream 19679 52102455 ~ 52102984 (+)
XLOC_015937 shda coding upstream 29158 52065884 ~ 52093505 (+)
XLOC_015936 yju2 coding upstream 59223 52049239 ~ 52063440 (+)
XLOC_015935 NA coding upstream 172935 51941626 ~ 51949728 (+)
XLOC_015934 acvr2bb coding upstream 267995 51818039 ~ 51854668 (+)
XLOC_015940 NA coding downstream 14699 52154395 ~ 52202451 (+)
XLOC_015941 plpp2a coding downstream 92934 52232630 ~ 52306803 (+)
XLOC_015942 NA coding downstream 432626 52572322 ~ 52599189 (+)
XLOC_015943 creb3l3b coding downstream 707353 52847049 ~ 52904765 (+)
XLOC_015944 si:ch211-182e10.4 coding downstream 974780 53114476 ~ 53122798 (+)
XLOC_015932 NA non-coding upstream 356641 51752457 ~ 51766022 (+)
XLOC_015929 NA non-coding upstream 529085 51477657 ~ 51593578 (+)
XLOC_015930 NA non-coding upstream 552633 51568650 ~ 51570030 (+)
XLOC_015946 NA non-coding downstream 1195082 53334778 ~ 53338223 (+)
XLOC_015948 NA non-coding downstream 1304001 53443697 ~ 53461828 (+)
XLOC_015949 NA non-coding downstream 1439553 53579249 ~ 53580772 (+)

Expression


Co-expression Network