XLOC_015944 (si:ch211-182e10.4)


Basic Information

Item Value
gene id XLOC_015944
gene name si:ch211-182e10.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 53114476 ~ 53122798 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031617
GGTGGAGACCGCGTGAGCGCGCATTTTCTAATGTCTGTGCTGGACACTATTACATAAAAAGCAGATTTGCACATTACAGAAAAATCAGAGCAAAGCCAACCAGGATGAGCTGGAAATGATTTTCTGAAAGCTTCATTGTGGACAAGTTTTGTAGATTTTGCATGGCATCCAGGACTGATGCACAACACAAAGAGATGGCCTCTCAAGAAATCATGATTTTGCGCGTTATTCTCACAGAAGCTGATATCAGAAAAGTCACACTGACTTCAAAGCCATGTTCAGTTGAAGATTTGATCAACTGTCTCAGAAACACTCTTGGACTGAACTATAATTTTACATTGCAGTTTCGAGATCCTTTCTTTGATCATGAATTTTGCAATGTAACTGCTTTGGAAGAGCTCCCTGAGAAGCCAACAGTAAAAATTATCCCAGTGCTTGAATTGGTGTCAGTGGCAgaagatgaaatgcagtcatcAAGTGAAATATCGAGTAATGCTCCAAGTACTGCAGATACAGTACTGATTTCTGAATCAccccagaaaaagaaaatgccaTGGCCTGATATCTTCTTGATTCCGAAATTTTCGGTCGACGTTGAATTCAGGCTGCGTCAGGCCAATTTAATCTACTTGAAGGATGGAACGCatctaaaaatgacaaaagaactGAAACATGACATTCTTCAGAAACTTGCTGAAACCATATACTCCTTCAAAGCATACCCATCTGCTGACGATTTAAAAGGTGTTGCAAAGGCATTGGTGAATACCCACCCCTGCCTTCAAGAACCAGGATCGCCTTCTGGACACTGTGGGTGGACAAACAGTTTGAAAGACAAAATGGGAAATTACAGATCCAAAATGAGAAGCCTTGGGCACACAGATGTCACAGTTAATGCAGGAAAAAGAGGAAGATACTCTACTAGCAGTGATCCACctaacaagaacataaaaaaaccAAGGAAAGGAGAGGTCAACTATCTACCTAACCTTCCAAGTGGTCATGATACTTCCAGTCTTGAGTTGCTCAGACAGCAGTTGGCAGAtgaaacgaagaaaaaaaaacctgatgcTACCTTCATTAATCAGAATATGGATGTGACTCTGTCTTTAAGAAGACAGGAAGTTGTGATCAACAAGCCTCCTGTAAGCCAGATACTTCAGCGTTGGCCAGCACTTTTCACTGAAAGTCAGGTGTATCAAGAATTCAACCGAATAGTTGGGAAGAATCTGAAGCAAGAATTCTATGGGTCTCTTGATCATCACTGCCCACAGCTGATTCAGATCTTCAGGTCAAAGAGAGGTCTCACTGGACAGATTTTAAGCAGTCTTCTGCTAGATGCCAAGGCCTCTGACCTCAGTGACATGCGATGTGTTGTCGTTCGAGGGCTTCCAGTACTTCTTGGTGATGACCCATCTGAGTTTTTCAAATCATGTTTTGCTTCTGATGATGGAGACTCATACCAACATGTGCCCGTTGGAATCCTTAACCGGGAAAATGAAGATGCTCTGCAACCCCTGTCCTTCCGCCTCCACCCATCCTCAGTGGGAATCATCTTGGAAGGGAATGTTGTAATGGACAATATAGACAACATACCCCAGGCCATGTGTCTTCTTTTTGGTTTAACTTATGCACTGCACCTAGACTACCCAAAGTGCATGGGCAATACCCTTCTTTTCATTCAACAAGTTCTGCTGGGTTTGGGTAAGAAGGAGCTGAAGGGTAAGATTCTGGCTGTCAAAAATCAACTTGCCATGTAAACAGGTACAGAAAAGTCATGTTCCTTCAGGCTTGCTGTTCTGCTGTAACTGTGATGGAAAAGTGTAAAACTTTGCCTTAGTGTTTGGCAAGTGTTAATGTTCTATAATGATACGGTGTAATGTAGgattgtcacaatactggaattcgataccaattggtactgaaatttaaaaaatgttcattccCGCTTACATTCAAGTGCTGTTGAGCGTGttgttaaacagcactgatttgccattgtgttcacatgctcaacagaaatgactgtgaaggTGTTCGGTTCACCTAACTCACCACTTTTTATTGAGCGTAAACCCAGATACAGGGATACTGGAGTGTTTAAAGTCAAGTTAATCAGCTGTCTATAAGCTGacaagcgatccgctgatgaattatggctttaaaacgctcatgggtccctgtatctgtgtttacactcagtaaacagcagtaagTTCAGTGATCCGATGACCACAGCcattcacagtcatttctgtggagcacgtaaacacaatggcaaatcagtacTGCTTAAGAATGTGcttaacagtgctcaaatgttagcgggaaatagactttttttttttttttaacttcagtaccgattggtattgAATTC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-76 No description available

Ensembl:

ensembl_id ENSDARG00000070661

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031617 True 2380 mRNA 0.42 7 53114476 53122798

Neighbor

gene id symbol gene type direction distance location
XLOC_015943 creb3l3b coding upstream 209711 52847049 ~ 52904765 (+)
XLOC_015942 NA coding upstream 515287 52572322 ~ 52599189 (+)
XLOC_015941 plpp2a coding upstream 807673 52232630 ~ 52306803 (+)
XLOC_015940 NA coding upstream 912025 52154395 ~ 52202451 (+)
XLOC_015939 theg coding upstream 974780 52122663 ~ 52139696 (+)
XLOC_015945 zgc:165603 coding downstream 81952 53204750 ~ 53238469 (+)
XLOC_015946 NA coding downstream 211980 53334778 ~ 53338223 (+)
XLOC_015947 celf5b coding downstream 235155 53357953 ~ 53426522 (+)
XLOC_015948 NA coding downstream 320899 53443697 ~ 53461828 (+)
XLOC_015949 NA coding downstream 456451 53579249 ~ 53580772 (+)
XLOC_015938 NA non-coding upstream 1011492 52102455 ~ 52102984 (+)
XLOC_015935 NA non-coding upstream 1164748 51941626 ~ 51949728 (+)
XLOC_015932 NA non-coding upstream 1348454 51752457 ~ 51766022 (+)
XLOC_015951 CU861888.1 non-coding downstream 563273 53686071 ~ 53686188 (+)
XLOC_015954 NA non-coding downstream 919980 54042778 ~ 54043791 (+)

Expression


Co-expression Network