XLOC_016382


Basic Information

Item Value
gene id XLOC_016382
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24528124 ~ 24536126 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033831
CTGAGGTCTGAGGTGGTCTGTTCCACTGTGAGAATTAGGGGAAAGTTCATGCTCACAAAGAGACACCATTTGCTGGGGGATTCTGAAGACTACACTCAGTTACGTTTTGAAGAGGTGTCTGGGAATTTGCCTCCCTATCGAATAGCAATACTCCTGTggatttctttctcttttttaaatttttggttGTTTTGTCTTGTGATACAAAGGACTAAGTGTTTACTTCTGTTAGGTGATATCAAAGTACAAGTGTTACAGAGTTTACCCCTCAGCAtttgagagcttttctttttgtttttggggaagagatttgcttgttttttttttttactgtgtactttGCAGACTTGGTAAAAACAGGATTTGAAAGGATATTTGTAAGTGGAGCAGAAGCCAGGACGTTGTTTTGTTTGGTGAAAATGATCTCAGTCACGTCTGGAATTATATGACTCATTAAGCCAACTTATAGTCTGTACATCattcaaaggtttggggtcagaaAAGGCTTTTAAAACAAAGTTCGCAATTGCTTTTGGTTTCATGAAAAATATTTAACATCCATGAAACTTTTTCATCACATAAAATGTTTCATTACAGaggaaatgtttttaaatgtttaatgttctTCGaatttacctcacagcaagaaggttgctggtttgagtcccggctgggtcagttggcatttctgtttggagttggcatgttctcctcgtgttcgcgtgggtttcctttggatgCTCCAGttaccaaagacatgcagtacaggattattTGTTGAACTGAAAGGAAGTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033831 True 795 lncRNA 0.38 2 24528124 24536126

Neighbor

gene id symbol gene type direction distance location
XLOC_016381 BX530024.2 coding downstream 22034 24505975 ~ 24506090 (-)
XLOC_016380 si:rp71-39b20.4 coding downstream 22939 24495804 ~ 24505185 (-)
XLOC_016379 insl3 coding downstream 39472 24487320 ~ 24488652 (-)
XLOC_016378 kcnn1a coding downstream 65847 24410494 ~ 24462277 (-)
XLOC_016377 zgc:154006 coding downstream 120191 24386453 ~ 24407933 (-)
XLOC_016383 NA coding upstream 9354 24545480 ~ 24545941 (-)
XLOC_016384 cnn2 coding upstream 12123 24548249 ~ 24554432 (-)
XLOC_016385 NA coding upstream 18891 24555017 ~ 24565293 (-)
XLOC_016386 NA coding upstream 32763 24568889 ~ 24572694 (-)
XLOC_016387 crtc1a coding upstream 41927 24578053 ~ 24603325 (-)
XLOC_016374 NA non-coding downstream 210688 24310635 ~ 24317436 (-)
XLOC_016372 dre-mir-736 non-coding downstream 266828 24261217 ~ 24261296 (-)
XLOC_016370 CR788285.1 non-coding downstream 422649 24076013 ~ 24105475 (-)
XLOC_016369 NA non-coding downstream 458690 24026569 ~ 24069434 (-)
XLOC_016388 NA non-coding upstream 142570 24678696 ~ 24699164 (-)
XLOC_016389 NA non-coding upstream 292878 24829004 ~ 24829209 (-)

Expression


Co-expression Network