XLOC_016370 (CR788285.1)


Basic Information

Item Value
gene id XLOC_016370
gene name CR788285.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24076013 ~ 24105475 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032235
GAACAACAGCTGAGATCCTCCGAGTGCTGAGCGTTCAGGTAGGGAGAGCAGTTTGTCCAGGGCTACTGACTCATGGCCCATATGAGGCATCGGCTGCATGAAGCCTTTTTCAGTGTCTTCATGCAGAGACTGTTTACTGCCACTCAGAGAGTGCAGCAAGGGCAGTGGCAGCCGGAGACGACGTCGTCTTGCTGAGGAAATACCCAAGGAAATTTGCTGAAGCATCATTATCCTTCAAAGTTCCCTCAGAGGAGTTCTCCGGGTGTCCTTCCAGCAGGATGCTCATTCTGAGGCCTCCTGAGATTGTGTAGATCCACTTGATcaaatccaagacctgtgaagagataaTGTCAAGCATCCAAGGCCTTTGAGGACAGCACATACACTTAATGCCCTTCACTGAACATTTTTTTGGAAGTacactatataactgcaggttaaatATGTTCATGTACGATGTCTGCCCGATACACATCTTCTTAtctttttctgattttgatttgaA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093197

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032235 True 505 lncRNA 0.47 3 24076013 24105475

Neighbor

gene id symbol gene type direction distance location
XLOC_016369 NA coding downstream 6579 24026569 ~ 24069434 (-)
XLOC_016368 col15a1b coding downstream 53928 23936954 ~ 24022085 (-)
XLOC_016367 tgfbr1a coding downstream 144477 23856045 ~ 23931536 (-)
XLOC_016366 si:dkey-24c2.7 coding downstream 291974 23773078 ~ 23784039 (-)
XLOC_016365 xirp1 coding downstream 307181 23749614 ~ 23768832 (-)
XLOC_016371 myh7 coding upstream 147512 24252987 ~ 24270062 (-)
XLOC_016372 dre-mir-736 coding upstream 155742 24261217 ~ 24261296 (-)
XLOC_016373 myh7l coding upstream 168818 24274293 ~ 24289726 (-)
XLOC_016374 NA coding upstream 205160 24310635 ~ 24317436 (-)
XLOC_016375 ano8a coding upstream 216276 24321751 ~ 24348948 (-)
XLOC_016351 NA non-coding downstream 632824 23406472 ~ 23443189 (-)
XLOC_016347 BX548024.1 non-coding downstream 988689 23084639 ~ 23087324 (-)
XLOC_016346 NA non-coding downstream 1048951 23025245 ~ 23027062 (-)
XLOC_016343 BX649390.1 non-coding downstream 1178612 22897285 ~ 22897401 (-)
XLOC_016381 BX530024.2 non-coding upstream 400500 24505975 ~ 24506090 (-)
XLOC_016382 NA non-coding upstream 422649 24528124 ~ 24536126 (-)
XLOC_016383 NA non-coding upstream 440005 24545480 ~ 24545941 (-)

Expression


Co-expression Network