XLOC_016368 (col15a1b)


Basic Information

Item Value
gene id XLOC_016368
gene name col15a1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 23936954 ~ 24022085 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032227
CGGAGCGCCGTGTAGCACTGAGACTGAGGCAGTCTTTGTTCAGCCACGAAGTGAGAGAGACTGGAGAGAGTCAGTCAGgagaacagaaagagagagagagagagtgggtgACAACACTCTGGAAGTGTTGATATCCACGTTTTTGCACTAATCTCATGCTTGGACTTTtgaacaaaaatgaaatttcGCCTCCTGTCGTGGCTCGTTGGTGCACATCTCGCCTTGGGTTATCTCTCCTCTGCGCTTCATGTCATGGAAGAGCGAGGCTCCAAGGGTCACCTAATTCTAACAGACCTCGTTGGCATGCCTCTTCCACCATCCGTGTCCTTCATCACGGGCTACGAGGGTTACCCTGCCTACTCTTTTGGGCCTCATGCTAACGTAGGCCGACTGACCCAGTCTTTCGTACCTGAGCCCTTCTTCACAGACTTTGCCATCATCGTCACAGTCAAACCATCTAGCTCTCGAGGAGGAGTCCTGTTTGCCATCACAGACCCGTCCCAGACCATTGTCCAACTTGGCCTGGCCCTGACACCCGTGGAGGACCAGACTCAGCGGATTGTACTGTATTACAGTGAGCCGAGGTCAGCGAACAGCGCAGAGGTTGCGTCTTTTAAAGTGCCAGACATGACGCAGCAGTGGAGCCGCTTCACACTGTCGGTGGAGCGCCAGGAGGTTCGTCTCTACATGGACTGTGATGAATACCACATTGCCCCCTTCAAGAGGAGCCAGCAGCCCCTCAGCTTCAAGCCTGGATCGGGGATCTTTGTGGCGAATGCGGGTAGTACCGGCCTGGAGAGATTTGTGGGGTCAATCCAACAGCTGGTAATAAAACCTGACCCCAGAGCAGCAGAAGAGCAGTGTGAGGAAGACGACCCCAGCCTGCAGGCCTCCGGGGACAGAAGTGGCGATGGTGATTATGATGATGAGGAAGAACATGCGAGGCGTGAAGAAACCTTTGGGCAGACTAACAACAAGGAAAAGACACTAAGACCCACCTCTCCTGTTGAAGCCCCACCCATTCAGTCACCTGACATAGAAGAGGGTGGATTCTCAGGACATGTGACCCCAATAGATGAAAGGCTGCTGAGAGGGACTTACAAAACAGATGAAACAGGGGAGAGGGTTGGACAGAAAGGGGAGCGTGGAGAACCTGGGCCTGCAGGGCCACCTGGACCCCCTGGGCCTCCAGGAACATCTGTCCCAATCAGACATTCAGGACAGCCTGGACCGAGAGGACCACAGGGTCCAATTGGTCAGCCAGGAGGACGAGGCAGACCAGGGAAAGATGGACAACCTGGAAGCAAAGGTGAAGATGGGAAACCAGGTCAGAGAGGACAGACGGGACCTCCTGGATTACCTGGAGAATCTGGAGTCAAAGGAGAGAAGGGTGATCCTGGAGTGGGCCGGACTGGATTGCCTGGTCCACCAGGACCTCCTGGACCACCAGGGCCAAGCAAACCAGTTAAGGTTCCATATGGATTTGATGCACTGGGCTCTGGATTTGGAGATGCTGACATTGATACAGAACTTCTTCGGGGTCCACCTGGTCCTCCAGGGCCTCCTGGGATACCCGGCCCTCCTGGTCCTAATAGCCCACTTGGAGGATTGCTCCCTGGTCCTCCAGGGGCTCCTGGCAAAGATGGCAGAGATGGGCAGAGTGGGCTCCCTGGTGTTCCTGGTCAGGATGGCTTACCTGGACAACAGGGTCCGAAAGGAGCAAAGGGTGAGCACGGAATTAGAGGGCCTCCTGGACCTAAGGGTGAAAATGGAGATCCTGGTCAGAGAGGACCACCTGGCCCTTTTGGAACGATGGGACCGAGAGGTTTACCAGGACCACCAGGGCCTCCGGGTCCACCAGGGCCCATAAACAATAACTTTATGGTGGATACTTTGAAGGATTTCGAGGGTTCTGGTGAAAGTGGTTCATTTCTCGGAACTGGAATTTTGAAAGGCTATCAAGGGCCTCCTGGTCTTCCTGGCCCACCAGGACCTCAgGGACCTCCTGGTGCTAACGGACCACCTGGCTTGTCTGTAAAGGGTGAAAGAGGATCTCCAGGACCCGATGGAATACATGGATTAGCTGGTTTACCAGGAGCaaggGGACCAAAGGGAGACAAGGGCAATCCGGGAGAAAAgGGTGAGCGAGGTCGCGATGGACTGAACATCACAGGTCCTCCCGGCCCCcccggccctcctggaccaatCATTAACTTCCAGGACCTTTTTCTTAATGACACAGCTGCTAAACTGAACCTCACAAAGATCAGAGGACTGCCAGGCCCTATGGGCCCTGAAGGCTTGCCTGGCAGAGCAGGATTCCCTGGCCCAAGAGGACCAAAGGGGGAAATTGGGTTTCCTGGTGTGCAAGGACCTCCAGGACTAAAGGGGGACAAGGGTGAGCCAGGTGTATCCATCGCTGCTGATGGCTCTATAATCACAAGCCTGCGAGGACCCAGAGGACCAAAGGGAACCAAGGGAGACATTGGTCTTGCTGGCCCACATGGGATTCCGgGGCCAATTGGACCACCTGGACTAAAAGGGGGATATGGAATTCCTGGTCGACCGGGTCGACCTGGAATAGCTGGAAGGAAAGGGGACAAGGGAGATGCAAGTGGTCCCTCTGGTCCACCAGGTCCACCTGGACCTCCAGGGCCACCAGGACGAGTGATTGGCCTCAATGGAGGTCCTAAAGGTGATAATGGCTACAATGGGCAAAAGGGAGAGAAAGGTGATCCAGGTTTGCCTGGCCCTCCTGGACTTCCTGGGAGAACAGGCCTTGTTGGTCCTAAAGGGGAATCTATTGTTGGTCCTCCTGGAGACACTGGTGCTCCAGGACCTCCAGGACTGCCTGGGTATGGAAGTCCAGGACCACAAGGCCCACCAGGAGCtcctggccctccaggaacctCATCACTATACAGCTCAGCTGCAAGTCTCCCCGGACCTCCTGGACCTCCAGGGCCACCTGGTGCTCCTGGCTATGGAAACCCTGTGAGCACATATAAAAACAGCCAGACCTTGATGAGAGAGAGCAGCCAAGCAGCAGAAGGCACAATGGGATATGTTATTGACAAGAGTGAACTGTACATCAGGGAGTTAAAGAGCTTTCTGCCAGGCTATAATCTTCTTCCGGACACTACACACTCAATGCCTGCGTTGCACTTGGTGGCTCTCAATGCCCCATTCTCAGGAGACATGCATGGCATCCGCGGGGCAGATTACCAGTGTTACCAGCAAGCCAGAGCCAGAGGCCTGACATCCACATACAGAGCTTTCCTTTCCTCTCATCTGCAAGACCTCTCCACCATCGTCAAGAAAGCAGACCGTTTTAACTTACCGGTGGTGAATCTAAAAGGAGAAGTGCTGTTCAGCAGCTGGATGGCCATGTTCTCTGGTAATGGAGGCGTTTTTGATCCACTTACTCCGATTTACTCCTTTGATGGACGAAATGTCTTGACAGATCAGGCTTGGTCTCAGAAGCTGGTGTGGCACGGGTCAAGTACGGTGGGCATCCGAATGACAACAAACTACTGCGAGGCCTGGCGGACAGGTGACATGGCAGTAACCGGACAGGCGTCTCTCCTTCAGACCGGCCGACTGCTGGGACAGCACACACGCAGCTGCTCAAACCACTTCATCATTCTCTGCATCGAGAACAGCTACATCCAGCACCCTGGAAGGAACTAGAAAGCCCAACGTTTACAAGTAATTGAAAGCAGCAGTAGCTGGACTGCTGGGGAAAATTATCCATTCTCCTCCTTTTTAGCTCCTGGGAGAAATAACAAGCCAGGAAAAAGCCAGGCACTGCATTGGTCTTTCACTTCTTGTCTGAGCATgatgtaaatatgtataaatcACCCACTGGTATTGTTCAATTGAAGACCCACCGACTTTCATTCAACTATTAGAAAACCAAAGAATACCTCAGTCAGACATCTATGAGCAAGTGTAGATCCACTTTATGAATTCACCACATTATTTTTTTGCCTTCTAAAAAGGTTTTAGCCCTCATTACGATCACTAATAtagctttgtgtgtgtgcttgtattaACTACATTGTTATAACCGCACACACTGATAGATACAAGACACTTACTTTTAATCagattaaatatatttagatatcaGTATTTGGGTATATTCAAACAAACGAGGGAGATGTTTAAATGCACTGTATTAATAATTTCTTGggtgttgttattttatttttggttatagTTTGTTTTGACACCCATGAAGCTCTATTCTGTGAACTTGCATTTAAACTAGTATTTAAGGGAGGCGATGCGTCTAATTTATGATGTTAATGCACATAACTAAAACCCAAGTGCATAATAGATACTGATTTAGAAAGTAGACAATGGCCACAATCATTTATAACTCATCACTGTGTTTAATCTCTCACATTTAGAAAGGCAAACTAGAAAGTAAGTTATGTTATTTGTATCTTCTAGAAGTCAAATAGGAGTATGATACAGCAATAGAGAGATACCCTCGTTTTCTCCTTTTTTCAAATTTGAATGGTGCTCACTgaataaatttttgttttataagtA
>TCONS_00032229
ATGAAttttagCCTCCTGTCGTGGCTCGTTGGTGCACATCTCGCCTTGGGTTATCTCTCCTCTGCGCTTCATGTCATGGAAGAGCGAGGCTCCAAGGGTCACCTAATTCTAACAGACCTCGTTGGCATGCCTCTTCCACCATCCGTGTCCTTCATCACGGGCTACGAGGGTTACCCTGCCTACTCTTTTGGGCCTCATGCTAACGTAGGCCGACTGACCCAGTCTTTCGTACCTGAGCCCTTCTTCACAGACTTTGCCATCATCGTCACAGTCAAACCATCTAGCTCTCGAGGAGGAGTCCTGTTTGCCATCACAGACCCGTCCCAGACCATTGTCCAACTTGGCCTGGCCCTGACACCCGTGGAGGACCAGACTCAGCGGATTGTACTGTATTACAGTGAGCCGAGGTCAGCGAACAGCGCAGAGGTTGCGTCTTTTAAAGTGCCAGACATGACGCAGCAGTGGAGCCGCTTCACACTGTCGGTGGAGCGCCAGGAGGTTCGTCTCTACATGGACTGTGATGAATACCACATTGCCCCCTTCAAGAGGAGCCAGCAGCCCCTCAGCTTCAAGCCTGGATCGGGGATCTTTGTGGCGAATGCGGGTAGTACCGGCCTGGAGAGATTTGTGGGGTCAATCCAACAGCTGGTAATAAAACCTGACCCCAGAGCAGCAGAAGAGCAGTGTGAGGAAGACGACCCCAGCCTGCAGGCCTCCGGGGACAGAAGTGGCGATGGTGATTATGATGATGAGGAAGAACATGCGAGGCGTGAAGAAACCTTTGGGCAGACTAACAACAAGGAAAAGACACTAAGACCCACCTCTCCTGTTGAAGCCCCACCCATTCAGTCACCTGACATAGAAGAGGGTGGATTCTCAGGACATGTGACCCCAATAGATGAAAGGCTGCTGAGAGGGACTTACAAAACAGATGAAACAGGGGAGAGGGTTGGACAGAAAGGGGAGCGTGGAGAACCTGGGCCTGCAGGGCCACCTGGACCCCCTGGGCCTCCAGGAACATCTGTCCCAATCAGACATTCAGGACAGCCTGGACCGAGAGGACCACAGGGTCCAATTGGTCAGCCAGGAGGACGAGGCAGACCAGGGAAAGATGGACAACCTGGAAGCAAAGGTGAAGATGGGAAACCAGGTCAGAGAGGACAGACGGGACCTCCTGGATTACCTGGAGAATCTGGAGTCAAAGGAGAGAAGGGTGATCCTGGAGTGGGCCGGACTGGATTGCCTGGTCCACCAGGACCTCCTGGACCACCAGGGCCAAGCAAACCAGTTAAGGTTCCATATGGATTTGATGCACTGGGCTCTGGATTTGGAGATGCTGACATTGATACAGAACTTCTTCGGGGTCCACCTGGTCCTCCAGGGCCTCCTGGGATACCCGGCCCTCCTGGTCCTAATAGCCCACTTGGAGGATTGCTCCCTGGTCCTCCAGGGGCTCCTGGCAAAGATGGCAGAGATGGGCAGAGTGGGCTCCCTGGTGTTCCTGGTCAGGATGGCTTACCTGGACAACAGGGTCCGAAAGGAGCAAAGGGTGAGCACGGAATTAGAGGGCCTCCTGGACCTAAGGGTGAAAATGGAGATCCTGGTCAGAGAGGACCACCTGGCCCTTTTGGAACGATGGGACCGAGAGGTTTACCAGGACCACCAGGGCCTCCGGGTCCACCAGGGCCCATAAACAATAACTTTATGGTGGATACTTTGAAGGATTTCGAGGGTTCTGGTGAAAGTGGTTCATTTCTCGGAACTGGAATTTTGAAAGGCTATCAAGGGCCTCCTGGTCTTCCTGGCCCACCAGGACCTCAgGGACCTCCTGGTGCTAACGGACCACCTGGCTTGTCTGTAAAGGGTGAAAGAGGATCTCCAGGACCCGATGGAATACATGGATTAGCTGGTTTACCAGGAGCaaggGGACCAAAGGGAGACAAGGGCAATCCGGGAGAAAAgGGTGAGCGAGGTCGCGATGGACTGAACATCACAGGTCCTCCCGGCCCCcccggccctcctggaccaatCATTAACTTCCAGGACCTTTTTCTTAATGACACAGCTGCTAAACTGAACCTCACAAAGATCAGAGGACTGCCAGGCCCTATGGGCCCTGAAGGCTTGCCTGGCAGAGCAGGATTCCCTGGCCCAAGAGGACCAAAGGGGGAAATTGGGTTTCCTGGTGTGCAAGGACCTCCAGGACTAAAGGGGGACAAGGGTGAGCCAGGTGTATCCATCGCTGCTGATGGCTCTATAATCACAAGCCTGCGAGGACCCAGAGGACCAAAGGGAACCAAGGGAGACATTGGTCTTGCTGGCCCACATGGGATTCCGgGGCCAATTGGACCACCTGGACTAAAAGGGGGATATGGAATTCCTGGTCGACCGGGTCGACCTGGAATAGCTGGAAGGAAAGGGGACAAGGGAGATGCAAGTGGTCCCTCTGGTCCACCAGGTCCACCTGGACCTCCAGGGCCACCAGGACGAGTGATTGGCCTCAATGGAGGTCCTAAAGGTGATAATGGCTACAATGGGCAAAAGGGAGAGAAAGGTGATCCAGGTTTGCCTGGCCCTCCTGGACTTCCTGGGAGAACAGGCCTTGTTGGTCCTAAAGGGGAATCTATTGTTGGTCCTCCTGGAGACACTGGTGCTCCAGGACCTCCAGGACTGCCTGGGTATGGAAGTCCAGGACCACAAGGCCCACCAGGAGCtcctggccctccaggaacctCATCACTATACAGCTCAGCTGCAAGTCTCCCCGGACCTCCTGGACCTCCAGGGCCACCTGGTGCTCCTGGCTATGGAAACCCTGTGAGCACATATAAAAACAGCCAGACCTTGATGAGAGAGAGCAGCCAAGCAGCAGAAGGCACAATGGGATATGTTATTGACAAGAGTGAACTGTACATCAGGGAGTTAAAGAGCTTTCTGCCAGGCTATAATCTTCTTCCGGACACTACACACTCAATGCCTGCGTTGCACTTGGTGGCTCTCAATGCCCCATTCTCAGGAGACATGCATGGCATCCGCGGGGCAGATTACCAGTGTTACCAGCAAGCCAGAGCCAGAGGCCTGACATCCACATACAGAGCTTTCCTTTCCTCTCATCTGCAAGACCTCTCCACCATCGTCAAGAAAGCAGACCGTTTTAACTTACCGGTGGTGAATCTAAAAGGAGAAGTGCTGTTCAGCAGCTGGATGGCCATGTTCTCTGGTAATGGAGGCGTTTTTGATCCACTTACTCCGATTTACTCCTTTGATGGACGAAATGTCTTGACAGATCAGGCTTGGTCTCAGAAGCTGGTGTGGCACGGGTCAAGTACGGTGGGCATCCGAATGACAACAAACTACTGCGAGGCCTGGCGGACAGGTGACATGGCAGTAACCGGACAGGCGTCTCTCCTTCAGACCGGCCGACTGCTGGGACAGCACACACGCAGCTGCTCAAACCACTTCATCATTCTCTGCATCGAGAACAGCTACATCCAGCACCCTGGAAGGAACTAG
>TCONS_00032228
ATGAAttttagCCTCCTGTCGTGGCTCGTTGGTGCACATCTCGCCTTGGGTTATCTCTCCTCTGCGCTTCATGTCATGGAAGAGCGAGGCTCCAAGGGTCACCTAATTCTAACAGACCTCGTTGGCATGCCTCTTCCACCATCCGTGTCCTTCATCACGGGCTACGAGGGTTACCCTGCCTACTCTTTTGGGCCTCATGCTAACGTAGGCCGACTGACCCAGTCTTTCGTACCTGAGCCCTTCTTCACAGACTTTGCCATCATCGTCACAGTCAAACCATCTAGCTCTCGAGGAGGAGTCCTGTTTGCCATCACAGACCCGTCCCAGACCATTGTCCAACTTGGCCTGGCCCTGACACCCGTGGAGGACCAGACTCAGCGGATTGTACTGTATTACAGTGAGCCGAGGTCAGCGAACAGCGCAGAGGTTGCGTCTTTTAAAGTGCCAGACATGACGCAGCAGTGGAGCCGCTTCACACTGTCGGTGGAGCGCCAGGAGGTTCGTCTCTACATGGACTGTGATGAATACCACATTGCCCCCTTCAAGAGGAGCCAGCAGCCCCTCAGCTTCAAGCCTGGATCGGGGATCTTTGTGGCGAATGCGGGTAGTACCGGCCTGGAGAGATTTGTGGGGTCAATCCAACAGCTGGTAATAAAACCTGACCCCAGAGCAGCAGAAGAGCAGTGTGAGGAAGACGACCCCAGCCTGCAGGCCTCCGGGGACAGAAGTGGCGATGGTGATTATGATGATGAGGAAGAACATGCGAGGCGTGAAGAAACCTTTGGGCAGACTAACAACAAGGAAAAGACACTAAGACCCACCTCTCCTGTTGAAGCCCCACCCATTCAGTCACCTGACATAGAAGAGGGTGGATTCTCAGGACATGTGACCCCAATAGATGAAAGGCTGCTGAGAGGGACTTACAAAACAGATGAAACAGGGGAGAGGGTTGGACAGAAAGGGGAGCGTGGAGAACCTGGGCCTGCAGGGCCACCTGGACCCCCTGGGCCTCCAGGAACATCTGTCCCAATCAGACATTCAGGACAGCCTGGACCGAGAGGACCACAGGGTCCAATTGGTCAGCCAGGAGGACGAGGCAGACCAGGGAAAGATGGACAACCTGGAAGCAAAGGTGAAGATGGGAAACCAGGTCAGAGAGGACAGACGGGACCTCCTGGATTACCTGGAGAATCTGGAGTCAAAGGAGAGAAGGGTGATCCTGGAGTGGGCCGGACTGGATTGCCTGGTCCACCAGGACCTCCTGGACCACCAGGGCCAAGCAAACCAGTTAAGGTTCCATATGGATTTGATGCACTGGGCTCTGGATTTGGAGATGCTGACATTGATACAGAACTTCTTCGGGGTCCACCTGGTCCTCCAGGGCCTCCTGGGATACCCGGCCCTCCTGGTCCTAATAGCCCACTTGGAGGATTGCTCCCTGGTCCTCCAGGGGCTCCTGGCAAAGATGGCAGAGATGGGCAGAGTGGGCTCCCTGGTGTTCCTGGTCAGGATGGCTTACCTGGACAACAGGGTCCGAAAGGAGCAAAGGGTGAGCACGGAATTAGAGGGCCTCCTGGACCTAAGGGTGAAAATGGAGATCCTGGTCAGAGAGGACCACCTGGCCCTTTTGGAACGATGGGACCGAGAGGTTTACCAGGACCACCAGGGCCTCCGGGTCCACCAGGGCCCATAAACAATAACTTTATGGTGGATACTTTGAAGGATTTCGAGGGTTCTGGTGAAAGTGGTTCATTTCTCGGAACTGGAATTTTGAAAGGCTATCAAGGGCCTCCTGGTCTTCCTGGCCCACCAGGACCTCAgGGACCTCCTGGTGCTAACGGACCACCTGGCTTGTCTGTAAAGGGTGAAAGAGGATCTCCAGGACCCGATGGAATACATGGATTAGCTGGTTTACCAGGAGCaaggGGACCAAAGGGAGACAAGGGCAATCCGGGAGAAAAgGGTGAGCGAGGTCGCGATGGACTGAACATCACAGGTCCTCCCGGCCCCcccggccctcctggaccaatCATTAACTTCCAGGACCTTTTTCTTAATGACACAGCTGCTAAACTGAACCTCACAAAGATCAGAGGACTGCCAGGCCCTATGGGCCCTGAAGGCTTGCCTGGCAGAGCAGGATTCCCTGGCCCAAGAGGACCAAAGGGGGAAATTGGGTTTCCTGGTGTGCAAGGACCTCCAGGACTAAAGGGGGACAAGGGTGAGCCAGGTGTATCCATCGCTGCTGATGGCTCTATAATCACAAGCCTGCGAGGACCCAGAGGACCAAAGGGAACCAAGGGAGACATTGGTCTTGCTGGCCCACATGGGATTCCGgGGCCAATTGGACCACCTGGACTAAAAGGGGGATATGGAATTCCTGGTCGACCGGGTCGACCTGGAATAGCTGGAAGGAAAGGGGACAAGGGAGATGCAAGTGGTCCCTCTGGTCCACCAGGTCCACCTGGACCTCCAGGGCCACCAGGACGAGTGATTGGCCTCAATGGAGTCAACAACAACAATTCACAACAAGGAGTCAAAGGGGAAAAGGGTGATGAGGGAAATCCTGGGTTGTCAGGTACTCCAGTCCCCCATGCTTATGTGGGTCCTAAAGGTGATAATGGCTACAATGGGCAAAAGGGAGAGAAAGGTGATCCAGGTTTGCCTGGCCCTCCTGGACTTCCTGGGAGAACAGGCCTTGTTGGTCCTAAAGGGGAATCTATTGTTGGTCCTCCTGGAGACACTGGTGCTCCAGGACCTCCAGGACTGCCTGGGTATGGAAGTCCAGGACCACAAGGCCCACCAGGAGCtcctggccctccaggaacctCATCACTATACAGCTCAGCTGCAAGTCTCCCCGGACCTCCTGGACCTCCAGGGCCACCTGGTGCTCCTGGCTATGGAAACCCTGTGAGCACATATAAAAACAGCCAGACCTTGATGAGAGAGAGCAGCCAAGCAGCAGAAGGCACAATGGGATATGTTATTGACAAGAGTGAACTGTACATCAGGGTACGAGGAGGCTGGAAGAAAATTGAGttaggaGAGCTAATCCCTGTTCCCGAAGACAGTTCCTCTTCTGCTTTGTCACAAGGCCTGAGCAGACCCAGCGACCGCAGCGTACCCAGAGTTCATAGTCAGGAGTTAAAGAGCTTTCTGCCAGGCTATAATCTTCTTCCGGACACTACACACTCAATGCCTGCGTTGCACTTGGTGGCTCTCAATGCCCCATTCTCAGGAGACATGCATGGCATCCGCGGGGCAGATTACCAGTGTTACCAGCAAGCCAGAGCCAGAGGCCTGACATCCACATACAGAGCTTTCCTTTCCTCTCATCTGCAAGACCTCTCCACCATCGTCAAGAAAGCAGACCGTTTTAACTTACCGGTGGTGAATCTAAAAGGAGAAGTGCTGTTCAGCAGCTGGATGGCCATGTTCTCTGGTAATGGAGGCGTTTTTGATCCACTTACTCCGATTTACTCCTTTGATGGACGAAATGTCTTGACAGATCAGGCTTGGTCTCAGAAGCTGGTGTGGCACGGGTCAAGTACGGTGGGCATCCGAATGACAACAAACTACTGCGAGGCCTGGCGGACAGGTGACATGGCAGTAACCGGACAGGCGTCTCTCCTTCAGACCGGCCGACTGCTGGGACAGCACACACGCAGCTGCTCAAACCACTTCATCATTCTCTGCATCGAGAACAGCTACATCCAGCACCCTGGAAGGAACTAG
>TCONS_00033824
TGTTTTTAAGGGTCCTAAAGGTGATAATGGCTACAATGGGCAAAAGGGAGAGAAAGGTGATCCAGGTTTGCCTGGCCCTCCTGGACTTCCTGGGAGAACAGGCCTTGTTGGTCCTAAAGGGGAATCTATTGTTGGTCCTCCTGGAGACACTGGTGCTCCAGGACCTCCAGGACTGCCTGGGTATGGAAGTCCAGGACCACAAGGCCCACCAGGAGCtcctggccctccaggaacctCATCACTATACAGCTCAGCTGCAAGTCTCCCCGGACCTCCTGGACCTCCAGGGCCACCTGGTGCTCCTGGCTATGGAAACCCTGTAAGTCATAT

Function

symbol description
col15a1b Predicted to be an extracellular matrix structural constituent. Acts upstream of or within eye development and regulation of motor neuron axon guidance. Predicted to be part of collagen trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including aortic arch; digestive system; nervous system; neural plate; and neural tube. Orthologous to human COL15A1 (collagen type XV alpha 1 chain).

GO:

id name namespace
GO:1905812 regulation of motor neuron axon guidance biological_process
GO:0030198 extracellular matrix organization biological_process
GO:0001654 eye development biological_process
GO:0031012 extracellular matrix cellular_component
GO:0005581 collagen trimer cellular_component
GO:0005615 extracellular space cellular_component
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-689 Predicted to be an extracellular matrix structural constituent. Acts upstream of or within eye development and regulation of motor neuron axon guidance. Predicted to be part of collagen trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including aortic arch; digestive system; nervous system; neural plate; and neural tube. Orthologous to human COL15A1 (collagen type XV alpha 1 chain).

Ensembl:

ensembl_id ENSDARG00000061848

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032227 False 4560 mRNA 0.51 38 23936954 24013260
TCONS_00032229 False 3513 mRNA 0.55 39 23937824 24022085
TCONS_00032228 False 3738 mRNA 0.55 43 23937824 24022085
TCONS_00033824 True 330 lncRNA 0.55 3 23943895 23947003

Neighbor

gene id symbol gene type direction distance location
XLOC_016367 tgfbr1a coding downstream 5418 23856045 ~ 23931536 (-)
XLOC_016366 si:dkey-24c2.7 coding downstream 152915 23773078 ~ 23784039 (-)
XLOC_016365 xirp1 coding downstream 168122 23749614 ~ 23768832 (-)
XLOC_016364 cdyl coding downstream 259532 23622788 ~ 23677422 (-)
XLOC_016363 si:dkey-58b18.8 coding downstream 327872 23604654 ~ 23609082 (-)
XLOC_016369 NA coding upstream 4484 24026569 ~ 24069434 (-)
XLOC_016370 CR788285.1 coding upstream 53928 24076013 ~ 24105475 (-)
XLOC_016371 myh7 coding upstream 230902 24252987 ~ 24270062 (-)
XLOC_016372 dre-mir-736 coding upstream 239132 24261217 ~ 24261296 (-)
XLOC_016373 myh7l coding upstream 252208 24274293 ~ 24289726 (-)
XLOC_016351 NA non-coding downstream 493765 23406472 ~ 23443189 (-)
XLOC_016347 BX548024.1 non-coding downstream 849630 23084639 ~ 23087324 (-)
XLOC_016346 NA non-coding downstream 909892 23025245 ~ 23027062 (-)
XLOC_016343 BX649390.1 non-coding downstream 1039553 22897285 ~ 22897401 (-)
XLOC_016341 NA non-coding downstream 1068234 22857105 ~ 22868720 (-)
XLOC_016374 NA non-coding upstream 288550 24310635 ~ 24317436 (-)
XLOC_016381 BX530024.2 non-coding upstream 483890 24505975 ~ 24506090 (-)

Expression


Co-expression Network