XLOC_016366 (si:dkey-24c2.7)


Basic Information

Item Value
gene id XLOC_016366
gene name si:dkey-24c2.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 23773078 ~ 23784039 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032225
ATGAGGAGCACAAGACCCACAGCTTAAGATGAGCTTCACCTTGAGAAGAAGTCAGTCCCTCAAGAGTCTCTCTGCGGGTCACAGTTCGTGGATTTGGGACAGAAAAACACCTGTTTCTCAGCTTGTCCAAAGGTATGAAAGCTGTGTGGATCTCACCGATGCTGGCAGAGAAGACTCCTGGTCCAAGCCATCAGGCCTGAGAAGATCAAACCATGAAGAGAGTAAAGTGGAAAACCTCTGGAGAAGATACGAGTCCCTCAGTGGGGCCAACGCCGCTTTATCAAGGAGCATCTCGATGGACATGCTGCCGCCGCCAGA
>TCONS_00033368
TCAATCACAAATTTGCAAAAGTTATGAGCTTCACCTTGAGAAGAAGTCAGTCCCTCAAGAGTCTCTCTGCGGGTCACAGTTCGTGGATTTGGGACAGAAAAACACCTGTTTCTCAGCTTGTCCAAAGGTATGAAAGCTGTGTGGATCTCACCGATGCTGGCAGAGAAGACTCCTGGTCCAAGCCATCAGGCCTGAGAAGATCAAACCATGAAGAGAGTAAAGTGGAAAACCTCTGGAGAAGATACGAGTCCCTCAGTGGGGCCAACGCCGCTTTATCAAGGAGCATCTCGATGGACATGCTGCCGCCGCCAGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-474 No description available

Ensembl:

ensembl_id ENSDARG00000092427

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032225 False 318 mRNA 0.51 4 23773078 23778180
TCONS_00033368 True 313 lncRNA 0.50 4 23773078 23784039

Neighbor

gene id symbol gene type direction distance location
XLOC_016365 xirp1 coding downstream 4246 23749614 ~ 23768832 (-)
XLOC_016364 cdyl coding downstream 95656 23622788 ~ 23677422 (-)
XLOC_016363 si:dkey-58b18.8 coding downstream 163996 23604654 ~ 23609082 (-)
XLOC_016362 si:dkey-58b18.9 coding downstream 170017 23602463 ~ 23603061 (-)
XLOC_016361 si:dkey-58b18.10 coding downstream 172257 23599896 ~ 23600821 (-)
XLOC_016367 tgfbr1a coding upstream 72006 23856045 ~ 23931536 (-)
XLOC_016368 col15a1b coding upstream 152915 23936954 ~ 24022085 (-)
XLOC_016369 NA coding upstream 242530 24026569 ~ 24069434 (-)
XLOC_016370 CR788285.1 coding upstream 291974 24076013 ~ 24105475 (-)
XLOC_016371 myh7 coding upstream 468948 24252987 ~ 24270062 (-)
XLOC_016351 NA non-coding downstream 329889 23406472 ~ 23443189 (-)
XLOC_016347 BX548024.1 non-coding downstream 685754 23084639 ~ 23087324 (-)
XLOC_016346 NA non-coding downstream 746016 23025245 ~ 23027062 (-)
XLOC_016343 BX649390.1 non-coding downstream 875677 22897285 ~ 22897401 (-)
XLOC_016341 NA non-coding downstream 904358 22857105 ~ 22868720 (-)
XLOC_016372 dre-mir-736 non-coding upstream 477178 24261217 ~ 24261296 (-)
XLOC_016374 NA non-coding upstream 526596 24310635 ~ 24317436 (-)
XLOC_016381 BX530024.2 non-coding upstream 721936 24505975 ~ 24506090 (-)

Expression


Co-expression Network