XLOC_016341



Basic Information


Item Value
gene id XLOC_016341
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 22857105 ~ 22868720 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033820
caaactacagctgaacaaaccactacagaacagATTCTCCTGCAGTGTGTACACACTCACGTGGGACGTTCCTCCGACTGGCTGAGGCTGCCGCTTTTGGACAAAGAAGATCAAAGCGTGAGCTTGTTTTGATGTGGCTTGGAGCTGAGTCAGAGCCCCCTGCAGACGCTCAACCTTCTCCACATACGCTCTCTTCCTCTGCAGCTCCGTCCACAGCTGCTGACTGCGGGTCTGTGTGGATCTCAGTGTGCTCTCCAGGGCCTCGCTCCTGCGCTGATGCTTCTCCGCTTCGTTTCGCAGATGCTGGACCTCCTGTTCCAGACACGCACACCGCAGCTTCTGCTCTTCATCTGTCACACAATAAGACAAACAAGAGATTTGagaattcaattaaaaaatgagCGGAACAGACTTTTAGAGAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033820 True 422 lncRNA 0.52 3 22857105 22868720

Neighbor


gene id symbol gene type direction distance location
XLOC_016340 NA coding downstream 5400 22845662 ~ 22851705 (-)
XLOC_016339 NA coding downstream 94650 22758806 ~ 22762455 (-)
XLOC_016338 NA coding downstream 129674 22707739 ~ 22727431 (-)
XLOC_016337 agxtb coding downstream 168454 22676743 ~ 22688651 (-)
XLOC_016336 thap4 coding downstream 196873 22652981 ~ 22660232 (-)
XLOC_016342 myo7bb coding upstream 11885 22880605 ~ 22927958 (-)
XLOC_016343 BX649390.1 coding upstream 28565 22897285 ~ 22897401 (-)
XLOC_016344 sap130b coding upstream 62439 22931159 ~ 22966127 (-)
XLOC_016345 mllt1b coding upstream 101420 22970140 ~ 23004355 (-)
XLOC_016346 NA coding upstream 156525 23025245 ~ 23027062 (-)
XLOC_016331 BX927330.1 non-coding downstream 422559 22434430 ~ 22434546 (-)
XLOC_016330 NA non-coding downstream 447916 22389790 ~ 22409189 (-)
XLOC_016347 BX548024.1 non-coding upstream 215919 23084639 ~ 23087324 (-)
XLOC_016351 NA non-coding upstream 537752 23406472 ~ 23443189 (-)
XLOC_016369 NA non-coding upstream 1157849 24026569 ~ 24069434 (-)

Expression



Co-expression Network