XLOC_016340


Basic Information

Item Value
gene id XLOC_016340
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 22845662 ~ 22851705 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033819
GTTCCCTGTCAGCCCACCAGGGTTTTCATAGCAGCCATGAGCTCTCGGGTTGTCACTACATTCAGTGCTGTAATTTAAGAAAGCAGTCCATGGCAACATAAAGccctgtattattattactacagggaGTGATGATGTCACCTTAATAGAGAAAAGATGTCAAAAGGTCTGAGCCAATCGAAAAGCCCTATCGAGGAGCCAAACTGGAATATCTCCATTCCTTCAGCATTTGTCCTGATATCTCACAGTTATAAAGCACCATGTGGGATTTTTTAGAGAAATCACAAGACTTGGAAAAGAAGACGAGTGAAAGAAGAAAGTTAAACTCAGCACCACAGGGATCAGATGTGGTTGTCTGGGTCGTGCAAAGCAGGCTGTTGGTATGCAGCACTAGAGAGGATGCTCTATACTCATCACAATTCAGCCTTTATTGGCTGCTACTGGCCTGGAATATTTTCATGGCACATTTGTGATTTAAGATGCGATTGAAGCATGAGACGGCCTTCAATGGACTGGGTTGTTCACGGGCCCATTCTGCTCCAGGCCACTTTATCTAGATAAAAAGAAGAAAACTACATTAAGACAAGCCCTTTGTATCAGCATAAATATAAAGCAGTCTTTAAACAAAACCCAGCAGAATGTTGCttttttaataatatcaacatgctttgtttaaatacattttatttgataaatgatCCAACTCAAATTCACATTTACATCTTACAGTGTGTGTATGGATAACTCTGTGAAAGTTAAGTATATGGGTCAAGTTAGGACAGAAAGAGTCATCAGCCTGATatgaaaacaaaatagttttgaaaaagcTTATCTGCTTAATCTTACATTGCAGGACATAATTCAGAGCACTTCGAAGTTATCATCGGTTCTCTGGAATTGCCGATAATTGGTCAGTAAATTCAATAAATCTCCCA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process

KEGG:

id description
ko03230 Viral genome structure
ko02010 ABC transporters
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033819 True 935 lncRNA 0.39 2 22845662 22851705

Neighbor

gene id symbol gene type direction distance location
XLOC_016339 NA coding downstream 83207 22758806 ~ 22762455 (-)
XLOC_016338 NA coding downstream 118231 22707739 ~ 22727431 (-)
XLOC_016337 agxtb coding downstream 157011 22676743 ~ 22688651 (-)
XLOC_016336 thap4 coding downstream 185430 22652981 ~ 22660232 (-)
XLOC_016335 stk25b coding downstream 208941 22617675 ~ 22636721 (-)
XLOC_016341 NA coding upstream 5400 22857105 ~ 22868720 (-)
XLOC_016342 myo7bb coding upstream 28900 22880605 ~ 22927958 (-)
XLOC_016343 BX649390.1 coding upstream 45580 22897285 ~ 22897401 (-)
XLOC_016344 sap130b coding upstream 79454 22931159 ~ 22966127 (-)
XLOC_016345 mllt1b coding upstream 118435 22970140 ~ 23004355 (-)
XLOC_016331 BX927330.1 non-coding downstream 411116 22434430 ~ 22434546 (-)
XLOC_016330 NA non-coding downstream 436473 22389790 ~ 22409189 (-)
XLOC_016328 NA non-coding downstream 497378 22340854 ~ 22348284 (-)
XLOC_016346 NA non-coding upstream 173540 23025245 ~ 23027062 (-)
XLOC_016347 BX548024.1 non-coding upstream 232934 23084639 ~ 23087324 (-)
XLOC_016351 NA non-coding upstream 554767 23406472 ~ 23443189 (-)

Expression


Co-expression Network