XLOC_016335 (stk25b)


Basic Information

Item Value
gene id XLOC_016335
gene name stk25b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 22617675 ~ 22636721 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032177
GAATCATAATCTGCGCATGCGCTGTAGGTCCTATTATTTTGTTCTCCCGCAAGCAATAAATGAAGAGCCGCCCGAGCCTGCGTTGATCGTTATAAAACAATAACACGCGGAAAGCGGTTCGCTCGCACGCTGATGCTTTCATAAATGGAGTCACACGACACATAACTGTCATTCTCGCCAGGCTGCGGGGTCCGCCATCAGGGGATTGGAGGCCGAAAACGCGGCTGACGAACAGGACATGCAGAGGTGTTTTTGTATGTAAAAGCTAGCTAGCTAAGCAGGGGAACCAGAGTAAAACGTTGTAGAGTTTGTCAGCACCCCTTCTTTGGCAGAAAAGGCTACATCTGCTCTCATCCACTGAGATGGCGCACCTCCGCGACATGCAGAACCAGAATTCCCGGCTTGATCCGGAGGAGTATTTCACCAAGCAGGAGCGAATTGGGAAGGGGTCATTTGGCGAGGTCTACAAAGGCATCAACAATCGCACTAAAGAGGTGGTGGCCATCAAGATCATCGACCTGGAGGAGGCAGAAGATGAGATCGAGGACATACAGCAGGAGATCACGGTGCTCAGCCAGTGTGACAGTCCCTATGTCACCAAATACTACGGCTCATATCTGAAGGGAACTAAGCTGTGGATCATTATGGAGTATTTAGGAGGTGGCTCAGCTTTAGATCTGTTGAAACCAGGCCCGCTAGAAGAGACGTACATCGCCACTATACTGAGGGAGATTCTGAAGGGACTGGAATACTTGCATTCGGAAAGGAAGATTCACCGTGATATCAAAGCTGCCAACGTGCTGCTGTCTGAGCAGGGTGACGTGAAGCTGGCAGACTTCGGGGTGGCAGGACAGCTCACAGACACCCAGATCAAGAGAAACACTTTCGTGGGGACTCCTTTCTGGATGGCTCCTGAGGTCATCAAACAGTCTGCGTATGACTTTAAGGCAGACATTTGGTCCTTGGGAATTACAGCTATTGAACTGGCGAAGGGGGAACCCCCAAACTCGGACCTGCATCCAATGCGAGTTTTGTTTCTCATTCCCAAAAACACTCCTCCAACGCTGGAGGGCTCCTACAGCAAACCCTTCAAAGAGTTCGTTGAGGCTTGCCTCAATAAAGACCCTCGCTTTCGGCCCACAGCCAAGGAATTATTAAAGCACAAATTCATCACACGATACACCAAGAAAACGTCTTATCTGACAGAGCTGATCGACCGATACCGCCGATGGAAGTCTGAGGGCCACGGAGATGAGTCTAGCTCTGATGATTCTGACATGGATGGTGATGGTGATGATAGAGACCACTGTCCTGTGTGGACGTTCCCCACAGTTCGGCCCAGCTCCATGAACAAGCTCCAGAAGGGCTACACAAACACAGACTCAgagGCGGCTGAGACGGTAAAGAGACAGCCCAAATCTCAATGTCTGTCAGCGCTGGTCTCTCCGATCTTCAGAGAGCTGAAGGAGAAGAGGAGAGCGTGTGGAGGAGGAATGGGTGCCATAGAGGAGCTGGAGAATGCCTTCAATCTGGCAGAAGAGTCCTGCCCGGGCATCTCTGACCTCCTGGTCACACACATCATGGAGAGAGTGTGCAGgttTGCTCTGAACGGCAACACCACGCCATCATCACGGTGAAGCTCCGCCTCCGCTGTCCCACCCCAAAACCATCAGAGCCCCATCAGGACCCCACAGTACAGCTGGCCAtcctcacactctctctctctctctttttctctctctctttctctctctctctcagcccaGAGATCTTTTAATTAGTTATGattcaatatttttacagttttctttATAGAATGGAAAGTATTTAAGAGAAAAAGCCATGTCATTGAGCAAACTGTGTTTACCTGTTAGATCAAAATCCTATTATAAAGTGTTTATGGAAA
>TCONS_00032178
GCTGTGGATCATTATGGAGTATTTAGGAGGTGGCTCAGCTTTAGATCTGTTGAAACCAGGCCCGCTAGAAGAGACGTACATCGCCACTATACTGAGGGAGATTCTGAAGGGACTGGAATACTTGCATTCGGAAAGGAAGATTCACCGTGATATCAAAGCTGCCAACGTGCTGCTGTCTGAGCAGGGTGACGTGAAGCTGGCAGACTTCGGGGTGGCAGGACAGCTCACAGACACCCAGATCAAGAGAAACACTTTCGTGGGGACTCCTTTCTGGATGGCTCCTGAGGTCATCAAACAGTCTGCGTATGACTTTAAGGCAGACATTTGGTCCTTGGGAATTACAGCTATTGAACTGGCGAAGGGGGAACCCCCAAACTCGGACCTGCATCCAATGCGAGTTTTGTTTCTCATTCCCAAAAACACTCCTCCAACGCTGGAGGGCTCCTACAGCAAACCCTTCAAAGAGTTCGTTGAGGCTTGCCTCAATAAAGACCCTCGCTTTCGGCCCACAGCCAAGGAATTATTAAAGCACAAATTCATCACACGATACACCAAGAAAACGTCTTATCTGACAGAGCTGATCGACCGATACCGCCGATGGAAGTCTGAGGGCCACGGAGATGAGTCTAGCTCTGATGATTCTGACATGTACGCCGTCCATCCATTGGATGGTGATGGTGATGATAGAGACCACTGTCCTGTGTGGACGTTCCCCACAGTTCGGCCCAGCTCCATGAACAAGCTCCAGAAGGGCTACACAAACACAGACTCAgagGCGGCTGAGACGGTAAAGAGACAGCCCAAATCTCAATGTCTGTCAGCGCTGGTCTCTCCGATCTTCAGAGAGCTGAAGGAGAAGAGGAGAGCGTGTGGAGGAGGAATGGGTGCCATAGAGGAGCTGGAGAATGCCTTCAATCTGGCAGAAGAGTCCTGCCCGGGCATCTCTGACCTCCTGGTCACACACATCATGGAGAGAGTGTGCAGgttTGCTCTGAACGGCAACACCACGCCATCATCACGGTGAAGCTCCGC

Function

symbol description
stk25b Predicted to enable ATP binding activity and protein kinase activity. Acts upstream of or within blood vessel morphogenesis and heart development. Is expressed in blastomere; brain; head; and post-vent region. Orthologous to human STK25 (serine/threonine kinase 25).

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0048514 blood vessel morphogenesis biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2537 Predicted to enable ATP binding activity and protein kinase activity. Acts upstream of or within blood vessel morphogenesis and heart development. Is expressed in blastomere; brain; head; and post-vent region. Orthologous to human STK25 (serine/threonine kinase 25).

Ensembl:

ensembl_id ENSDARG00000039022

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032177 False 1906 mRNA 0.50 11 22617675 22636721
TCONS_00032178 True 1032 mRNA 0.52 9 22617936 22631498

Neighbor

gene id symbol gene type direction distance location
XLOC_016334 SOX14 coding downstream 41824 22564928 ~ 22575851 (-)
XLOC_016333 znf644a coding downstream 86706 22506364 ~ 22530969 (-)
XLOC_016332 gtf2b coding downstream 125386 22480074 ~ 22492289 (-)
XLOC_016331 BX927330.1 coding downstream 183129 22434430 ~ 22434546 (-)
XLOC_016330 NA coding downstream 208486 22389790 ~ 22409189 (-)
XLOC_016336 thap4 coding upstream 16260 22652981 ~ 22660232 (-)
XLOC_016337 agxtb coding upstream 40022 22676743 ~ 22688651 (-)
XLOC_016338 NA coding upstream 71018 22707739 ~ 22727431 (-)
XLOC_016339 NA coding upstream 122085 22758806 ~ 22762455 (-)
XLOC_016340 NA coding upstream 208941 22845662 ~ 22851705 (-)
XLOC_016328 NA non-coding downstream 269391 22340854 ~ 22348284 (-)
XLOC_016327 NA non-coding downstream 302612 22313751 ~ 22315063 (-)
XLOC_016326 NA non-coding downstream 348698 22265382 ~ 22268977 (-)
XLOC_016341 NA non-coding upstream 220384 22857105 ~ 22868720 (-)
XLOC_016343 BX649390.1 non-coding upstream 260564 22897285 ~ 22897401 (-)

Expression


Co-expression Network