XLOC_016383



Basic Information


Item Value
gene id XLOC_016383
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24545480 ~ 24545941 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033832
ATTTATCTACAGGACTCCTGTTGAAGCAGGGGAGAGTTCGTctgaaaacagagagagagagttcagtcatcgtttactcaccctcatgtcttgaaacacaaaagaaggtatttttgAGAATGTTTGTAACCAAGCAGTTTTGGTTGCTATTGACTTCAATTGTGTGGAAAAGTGAAAGGTCATACCGGGGTTTTGGAACAACAGCAGTGAGCCAAACACTGAATGTTTACTTTTAGGTCAACTATAGATTTAAACAAATGTACTTTTATACATTATCTACCCAAAACGTCCAACTTTGCCTACAAGGTATTTACTGTCTGTAGTGTTCTGCTCCAGTGGTTCTTCTTAACATGgtaatacattacattaataGGCAGGATGAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033832 True 383 lncRNA 0.38 2 24545480 24545941

Neighbor


gene id symbol gene type direction distance location
XLOC_016382 NA coding downstream 9354 24528124 ~ 24536126 (-)
XLOC_016381 BX530024.2 coding downstream 39390 24505975 ~ 24506090 (-)
XLOC_016380 si:rp71-39b20.4 coding downstream 40295 24495804 ~ 24505185 (-)
XLOC_016379 insl3 coding downstream 56828 24487320 ~ 24488652 (-)
XLOC_016378 kcnn1a coding downstream 83203 24410494 ~ 24462277 (-)
XLOC_016384 cnn2 coding upstream 2308 24548249 ~ 24554432 (-)
XLOC_016385 NA coding upstream 9076 24555017 ~ 24565293 (-)
XLOC_016386 NA coding upstream 22948 24568889 ~ 24572694 (-)
XLOC_016387 crtc1a coding upstream 32112 24578053 ~ 24603325 (-)
XLOC_016388 NA coding upstream 132755 24678696 ~ 24699164 (-)
XLOC_016374 NA non-coding downstream 228044 24310635 ~ 24317436 (-)
XLOC_016372 dre-mir-736 non-coding downstream 284184 24261217 ~ 24261296 (-)
XLOC_016370 CR788285.1 non-coding downstream 440005 24076013 ~ 24105475 (-)
XLOC_016389 NA non-coding upstream 283063 24829004 ~ 24829209 (-)
XLOC_016398 CR786576.2 non-coding upstream 609901 25155842 ~ 25155958 (-)

Expression



Co-expression Network